SimpleSearch - Line and FST details


Line specific information

 
Line ID 425C12
Vector Used pAC161
Line Availability available as T3 set from NASC (N440740)
Segregation Analysis 50:41:30
Confirmed for Hit At2g25600
Parent of DUPLO pair none
Parent of pair(s) 3115, 9726

Gene hit At2g25600

 
Sequence (A. th genome BLAST matches underlined) 
>91-K017811-022-425-C12-8409
TGAGCCTTTACATTGAATATTCCCGGACTGAAGCCATAACTACTTTCTCCACAACTGGTT
ATGGTGATATACATGGTGTTAACTCAAGAGAGATGACTTTCATTCTTTTCTACATGGTTT
TTAATCTTGGACTGTCAGCATATATAATTGGTAATATGACCAACTTGGTGGTTCATGTGA
CCGGCCGCACCAGAAAATTTGTAAGTTCTATGTACCGGTACTGTTAACTGCACTTCTCTG
AAAATTAGTCTGGTCTCAGTGAAGTTTCATGAGTCTTAAGCATTTGCATTATTTTAGAGA
GATACCATCCAAGCCGCATCAGGGTTTGGTCAGAGGAACAATCTGCCAGTGCGGTTACAA
GATCAGATGGTTGCTCATTTGTGTTTGAGGTACAGAACTGATTCAGAAGGCTTACAGCAG
CAAGAAATAATCGATTCTCTTCCCAAAGCTATTCGGTCCAGCATATCACATTATCTGTTC
TATGAAGTTGTTGACAAAATTTACTTGTTCCATGGAATATCCAATGATCTTCTTTTCCAG
TTGGTATGTTTCCCATAACGCAAGAAGTCCTGCATGCNTAAAGTGGTCACTTTATTCACA
TTAAGTCTTAACTTACGGTGTCCTGTANGTCACGGAAATGAAAGCAGAGTATTTTCCTCC
CAAAGAAGATGTGATTTTGCAAAATGAAGCCCCACAGATTTCTACATATTGGTGACCGGA
GCTGNTGTAAGTGGTTTTCGTACATTCCTGACACATTCCTTTATCATCATGTATTATTCC
TGACACATTCCTATGTCATTCAGGACATAAATGCACGTGTAAATG
GenBank Accession BX289332 [GenBank]
Graphic View Graphic view of gene At2g25600
Predicted Position of Insertion Chr2:10895677 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F3N11
Hit Gene Code At2g25600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Shaker pollen inward K channel
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37