SimpleSearch - Line and FST details


Line specific information

 
Line ID 425D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N440746)
Segregation Analysis 50:42:28
Confirmed for Hit At5g48180
Parent of DUPLO pair none
Parent of pair(s) 2637, 97102

Gene hit At5g48180

 
Sequence (A. th genome BLAST matches underlined) 
>44-K017849-022-425-D06-8409
TATCATGTAGATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTAAGAGAAAAGA
GCGTTTATTAGCATCAACATTAGCATTTCCCGCCAATGGTGAGTAACGAAAAAAATGTGT
CCGGTGGAGAACAAATGGTTAAAGGTAAAGATTCAATCTTTCAATCTCTATAATACATAT
TAAGATTCTTTTATTTGGTTTCTTTGATCTTAGAAATGTAATGTGATTATGTTAATCAGG
TGGGTCAAAAAGGAGCTGGTCCTGGGGCTATGGGATCCTCCCTATAGTGAGANNNNNNNN
NANNNNNNNNTTNCCNNTTTTTTTTCNNTTCAAAAATGTAAATGTCCCCANCATAATTAT
ATTTTTTTCCCCCCCCCCCCCCCCCTTATNAACCATATAAAACCCATTCCATCTTTTNTT
AAAAAAAAAAAAAAACACCCCCCTCATACAACCACCCCTAACAACACATTTTCCCCCCCT
CCCCCCCCACATACAAAACAACAACCATTATTT
GenBank Accession BX289338 [GenBank]
Graphic View Graphic view of gene At5g48180
Predicted Position of Insertion Chr5:19542357 - go to primer design
BLAST e Value 2e-82
Hit Clone Code (BAC ID) MIF21
Hit Gene Code At5g48180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nitrile specifier protein 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37