SimpleSearch - Line and FST details


Line specific information

 
Line ID 425G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N440788)
Segregation Analysis 50:50:36
Confirmed for Hit At4g16100
Parent of DUPLO pair 12815
Parent of pair(s) none

Gene hit At4g16100

 
Sequence (A. th genome BLAST matches underlined) 
>95-K017811-022-425-G12-8409
ATTTCCCGGACTGAAGCCTTTATCTTGAATATATCCTGAGGAGTTTTCTTCTTCTCACGC
TCTTGTTGAAGTTTTCTCATCGGAGGTGGGTTATAAAACCGATTCTCGCCGCGGATCCTA
CGGGTAGTCGACATTTGTACAGGCCGGCGATGGAAAAAAGTACGTTGGGTGTGTGTGTGT
AAATGATGGTAGCGTTTCCTCTTCTTCTTCTTCGTTTGAAAAAAGGCAATGGGTATGGTT
TTAAACTTTTTTAGTGAATTAAAGAGCAGTCAAAGATGCCTCATGATGAGAGATTAGATT
TTATTGATTTTGTTTTGATTTGTTTGATAATTTAAACAAAAACGTCACCGTTTAAATTCG
TACAAATTGAAAAGGAAATTAATAACCTTTTTGACCAAAAATAAAATGAAAAAAAATTCT
GAAGCAAAAATAGAAATAAAGAATTAAAAAGAGCATATCGCATTTTTGTTATAAATATAA
AAAAAATTAAACGATCAATTCATTTTCATCAAAGTAATAATAACCAATTCATTTGGCATT
TTCAGTTCAATATTGTACGTTCACAATTTAACAAAAGTTATAATCCCTGATTTTTTTCCA
CGATTNNATATCATCNACACCGGATTTTAAAATCAGAATTTGATCTCATTTGTGTTGTAG
TTTTCTACATTGTTATAATTTTTATACATAAAATTAGACAA
GenBank Accession BX289378 [GenBank]
Graphic View Graphic view of gene At4g16100
Predicted Position of Insertion Chr4:9105896 - go to primer design
BLAST e Value 4e-158
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat shock protein, putative (DUF789)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37