SimpleSearch - Line and FST details


Line specific information

 
Line ID 427C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N440923)
Segregation Analysis 50:49:49
Confirmed for Hit At5g58870
Parent of DUPLO pair 2385
Parent of pair(s) none

Gene hit At5g58870

 
Sequence (A. th genome BLAST matches underlined) 
>19-K018076-022-427-C03-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGCACGACCTCCAAG
AAGAGTTACCAAGCGGCCATGTAGTTCATCAATAAAGAGCAAATATCTGTCTTCATGCGT
TGGGGGAATGTATGTAAAGCCCAATGCCCCTCCTGATCTTGGTAATATGCTTAATTTCTA
AAAATACAATATGTATTAGCAGAGCATTAACACATGTAAAAAATGAGTATCAAGCAACAT
GCGGTTCTCACTGCTTTACCTCAACACGGGACTGTCCAGAAAGAAGACTTGCAACAGCTG
TACCAACAACAGCATGCCCAGCTTCATGCCTTGCAACCACAGCTTTCTCACTACCTTTTA
ACCTATGGATCTCCCCTTTAGGGGAGAGAANGANNNNNNANNNNGGNNNNNCCNNTTTTT
TTTCTATTCCNAAATGTAAATNTCCCCAACGCTTTTGGTAGANNGGNNGTGNGGTGGCNA
GGCTTGATTCTGGGCCCGTTTTCTTGGTCCCCTTTTTGAAGGCTCCTTTGTTGAGGTCCC
CTGTTGAGGATCAAAAGTTAGAACGCCAGGGGCTTGATAGCCTTTTTAACNGGGTTGGCT
GCTCCCAAAGATTTTGTAGTTTGGGAACTAATCAGGTCACTNGATGAGGAGGGGGCTTGG
GCTTTCAAAACTCCCCCACCAGGAGAAAAATTTTATCTCTTTATTGATAAATTAAGGCCC
CTGGGGACTTGCTGGGGAGTGTGGCAGGAATTTCCAATGTNATTGCTCCAGTCGGGAATT
CTCCTGGATAACCTTTAATATAAATGGTATATGGGAAAAAAAGAAAAGGATT
GenBank Accession BX289510 [GenBank]
Graphic View Graphic view of gene At5g58870
Predicted Position of Insertion Chr5:23770839 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K19M22
Hit Gene Code At5g58870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FTSH protease 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX289510 [GenBank]


Last Updated on 10.06.2021 13:37