SimpleSearch - Line and FST details
Line specific information
| Line ID | 428E05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N441045) |
| Segregation Analysis | 59:50:34 |
| Confirmed for Hit | At1g10560 |
| Parent of DUPLO pair | 2732 |
| Parent of pair(s) | none |
| Note |
Gene hit At1g10560
| Sequence (A. th genome BLAST matches underlined) | >37-K018097-022-428-E05-8409 CTATGGGATCCTCCCTATAGTGAGACCTATGGAGAGAGATCGGAGAAAATCCAGATGCGA TTCCGGGATTGATGAATATCGTTAAAGGAGATGATTACGGCGATTCCGCCAAACGTAGCG CGTTGCTTGCGGTTATGGGTTTGTTAATGCAATCCGATAACCATTGGCGTGTTCTCGCCG CCGGAGCTGTTCCGATTCTTCTTGATCTGTTGAGATCGGGGGAGATTAGCGGCGGACTCA CGGCGGATTGTTTAGCGACGTTGGCGAAGCTGGCGGAGTATCCTGATGGGACGATTGGGG TGATTCGTCGTGGCGGTTTGAAACTCGCGGTGAAGATTTTGTCTTCGTCGGAGGATTCTC CGGTGGCGGTGAAGCAGCATTGTGTTGGTCTGATTTTGAACTTGTGTCTTAACGGAGGAC GTGACGTCGTTGGGGTTCTGGTGAAGAATTCGTTGGTCATGGGGTCGCTTTACACGGTGT TAAGTAACGGCGAATATGGAGGAAGCAAGAAGGCTATGGGATC |
| GenBank Accession | BX289597 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:3486050 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T10O24 |
| Hit Gene Code | At1g10560 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | plant U-box 18 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g07739
| Sequence (A. th genome BLAST matches underlined) | >37-K018077-022-428-E05-8409 TACTTTTTATTTTCAAATCTAAAGTGTGCTCCCTTTATTGAGCTCACGAAATCCCTCCCA ACTATGGGATCCTCCCTATAAAGAGAGGTCAGAAATCCATAATAGAGTCCGACCACAACG ACCGAATTTATTATCTTCATGCATAAGGATACTATGGGATCCTCCCTATAGTGAGANNAC CNNNNNNNNNNTNNTTCTCCTTCCCCTCTCCCTCTCCTTCTGTCCAGTCCCCTCCGGGTT ATGATCATATAAATTAGACTAACGAAGGGCAACGTGAACACCAAACACAACAAAATGTTT T |
| GenBank Accession | BX289596 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:3495927 - go to primer design |
| BLAST e Value | 1e-25 |
| Hit Clone Code (BAC ID) | T5E7 |
| Hit Gene Code | At2g07739 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ycf1 protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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