SimpleSearch - Line and FST details


Line specific information

 
Line ID 429H05
Vector Used pAC161
Line Availability available as T3 set from NASC (N441177)
Segregation Analysis 50:49:37
Confirmed for Hit At1g36280
Parent of DUPLO pair 12863
Parent of pair(s) none

Gene hit At1g36280

 
Sequence (A. th genome BLAST matches underlined) 
>40-K018098-022-429-H05-8409
AGGGAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGGATCCTCCCTATAGTGAGAGAA
TTTAAAATTTCCCAAATGAAATTAAACCATCCTTTCCCAAATGAAAGTTTGAACTCAGCA
CCAACAACAAGCAAAATTCAATCCTTCTCGTACTCACCAAATAAGCTATGGGATCCTCCC
TATAGTGAGAGGGANATATGTTGGCGCTGCTGCTGCATTGGCGCTATGGGATCCTCCCTA
TAGTGAG
GenBank Accession BX289745 [GenBank]
Graphic View Graphic view of gene At1g36280
Predicted Position of Insertion Chr1:13642660 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) F15C21
Hit Gene Code At1g36280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation L-Aspartase-like family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE664720 [GenBank] BX289745 [GenBank]

Gene hit T21L14

 
Sequence (A. th genome BLAST matches underlined) 
>40-K018098-022-429-H05-8409
AGGGAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGGATCCTCCCTATAGTGAGAGAA
TTTAAAATTTCCCAAATGAAATTAAACCATCCTTTCCCAAATGAAAGTTTGAACTCAGCA
CCAACAACAAGCAAAATTCAATCCTTCTCGTACTCACCAAATAAGCTATGGGATCCTCCC
TATAGTGAGAGGGANATATGTTGGCGCTGCTGCTGCATTGGCGCTATGGGATCCTCCCTA
TAGTGAG
GenBank Accession BX289745 [GenBank]
Graphic View Graphic view of sequence BX289745 of line 429H05
Predicted Position of Insertion Chr2:14000779 - go to primer design
BLAST e Value 7e-52
Hit Clone Code (BAC ID) T21L14
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37