SimpleSearch - Line and FST details


Line specific information

 
Line ID 434G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N441643)
Segregation Analysis 50:44:33
Confirmed for Hit At3g25560
Parent of DUPLO pair none
Parent of pair(s) 6062, 6068, 6069, 6099, 6163, 86062, 86076, 86098, 86099, 86101

Gene hit At3g25560

 
Sequence (A. th genome BLAST matches underlined) 
>52-K118683-0022-434-G03C-3144
CCTTCGCAGACCCTTCCTCTATTAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC
NGGGGATTATATATGTAAAATATAATTTAAAGAAGAAAATAAAAGAAAGAGAATGTACAA
AAAAGTGAGTTGGGTCATGTTTGCCAATGAGCTAGGAATTGTTCCTGTCAGGCTGTTATT
ATTAACCCTCCTGCTCCACAATTTTCAACACAAAAATAATCTCTCCATAAATAATTTATA
TAAAAAATATGATAAAATAAACAAAACGAAAAAATGGATAAAATCATACAAGTACTGAAG
ATTTTTGGAGTAAGAAAGAGTGAATGGGATTTGACCAGTGAAGTTATTGGTAGAGAGATC
AAGTGTTTTGAGTTTCATCAATTTCCCAATCTCATGAGGGATGTTTCCTGTTATGTAATT
GTTCTGCAATAACCTGTATCTCCAAACAAAATTATTAGAAAACTAAAGTGATTAAGAGAT
GAAGAAACAATGTTTTAATAATTACTACAAAACATACTTACACAGTTTGAAGATTTGTTA
AATTTCCAATACTTGATGAAAGAGTTCCTGATAAGTTTTGGCTTGGAGCTTCTCTACATA
CACACAATAGTAAAAACTGTAAACACATGATTACATATATGTGTGTGTGTGTGTGTGTGT
TGGTGTGTAAGTGCTTACAGCCTTATGACAAAACCATCAGAACAAGTGATCATGTTCCAG
CTACATGGATCAACTGCTGTGTCATCCCAATTCATTAGAACTCCATGAGGATCAGTCAGT
GAGCTTTTGATTCCTATTAAGGCAACAACTAAAGAAGAAACAAAAAAAGAAAAGCATGTT
TT
GenBank Accession HG968971 [GenBank]
Graphic View Graphic view of gene At3g25560
Predicted Position of Insertion Chr3:9281602 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MWL2
Hit Gene Code At3g25560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NSP-interacting kinase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HG968971 [GenBank]


Last Updated on 10.06.2021 13:37