SimpleSearch - Line and FST details


Line specific information

 
Line ID 434H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N441653)
Segregation Analysis 50:49:49
Confirmed for Hit At1g52670
Parent of DUPLO pair 2464
Parent of pair(s) none

Gene hit At1g52670

 
Sequence (A. th genome BLAST matches underlined) 
>08-K018189-022-434-H01-8409
GCTTACTGTGAGTTCGAACTCTGCAATGGATGAGGAATCGGTGATTTCGCTGATGAGTGC
TTCCACCTATCGGATCCCCCCNTATCGTGAAGGCCATTAGTACACTA
GenBank Accession BX290258 [GenBank]
Graphic View Graphic view of gene At1g52670
Predicted Position of Insertion Chr1:19616191 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) F6D8
Hit Gene Code At1g52670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Single hybrid motif superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T27E13

 
Sequence (A. th genome BLAST matches underlined) 
>08-K018179-022-434-H01-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTGACATCTGAAGGC
AGACGAATCATATGCTCTCGCCAGCTTTCATTTTCTTTTCTTTCTTCGTTGAGATTTATT
AATATTGTTTTCCATTTCTTAACTTGTAGATGTCTCCATCATATAGCTTTTAAGTTTTTC
TCCCAATAATGTTAGCAAGAAAAACAGATTTCTTCGTAAATAATTCACATTCTTTCAATC
TTGCTGACTCTAAATTTCAGCTATGGGATCCTCGCCTTATAGTGA
GenBank Accession BX290257 [GenBank]
Graphic View Graphic view of sequence BX290257 of line 434H01
Predicted Position of Insertion Chr2:12898959 - go to primer design
BLAST e Value 4e-115
Hit Clone Code (BAC ID) T27E13
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37