SimpleSearch - Line and FST details


Line specific information

 
Line ID 436H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N441852)
Segregation Analysis 50:45:33
Confirmed for Hit At2g24720
Parent of DUPLO pair none
Parent of pair(s) 4462, 4483, 10048, 10056, 10062, 94161

Gene hit At2g24720

 
Sequence (A. th genome BLAST matches underlined) 
>64-K018191-022-436-H08-8409
GTATCCCATTACTGTACGTCATGTTATTTATTCCCGCATCTTCAATGGCCATGGCCAGTG
CAGTGGTCGCATCATAAGCCCACAATCCATAGACATTCAGCTCCATCTGTGGGAATCTCC
TCTTCCAACGTGATCTAAACGTTCCTATGGGATCTCCNCTATAGTGAGANNNNNNNNNNN
NNNNNNNNNNCNNNTTTTTTTNNNNTTTNNNNNTTTTNNNTNTTCCNTNTTAATTTTAAA
AANNNNNNNNNNNNTNNNNTNNNNTNTNNNTNTTTTTTNNNTTTNNTTNTTTTTNTTTTT
NTTTTTTTNTNTTTTNNNNTTNTTTNTTTNNNTTTTTTTTNTTTTTTTTTTTTTTTTTTT
TTNNTTTTTTNTTTTTTTTTTTNTTTNNNNTTTNTNTTTTTTTTTTNNTTNTNNTNNNTN
TTTTTTTNTTTTTTTTNNTTTTNTNTNNNTTTTTTTNTTTTTTTTTTTTTTTTNTTTTTN
NTTTTTTNNNNTTTTTTTATAATNNNNNTTTTTATTCCACANAANNTTAANTNTAATNTA
CCACTNATAATTCCNTANNTCCAATCCNNCTTCCTCACACCCTAAACCCTACCTCCATAT
TTATAAAAATACCCCATACCCAAATTTACTTCTTACTCCTTTATTTATCCCCCTAATTAT
CCTCACTCTATATATTATTCACCCACATCTACCAAAATCCCCATTTATACCATACTCCAT
TTCAAATACAAACTAATATTTTATCCAACCTCTTTACCCCTTCCCACCAATAATCTTAAC
ATTTTCTTTATTAC
GenBank Accession BX290484 [GenBank]
Graphic View Graphic view of gene At2g24720
Predicted Position of Insertion Chr2:10524713 - go to primer design
BLAST e Value 8e-67
Hit Clone Code (BAC ID) F27A10
Hit Gene Code At2g24720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamate receptor 2.2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX290484 [GenBank]


Last Updated on 10.06.2021 13:37