SimpleSearch - Line and FST details
Line specific information
| Line ID | 438A05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N441957) |
| Segregation Analysis | 50:48:38 |
| Confirmed for Hit | At1g63690 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2861, 3074, 63917 |
Gene hit At1g63690
| Sequence (A. th genome BLAST matches underlined) | >33-K018214-022-438-A05-8409 TGGGTATGCTTACTATCACAGACATATTGCTTGTCATAATTGAATGGCTTGTATGTCTTG TATTGTCTCTGACACAACTTTACAAAATGGTGTGTGAACCGGATGAAATCGATTTAGATA TACAGATTCCTGCCGTCATGCTCCCGCAAGATGCTGGTGCATCCTTGCAAAAGATGCTAT GGGATCCTCCCCTATAGTGAG |
| GenBank Accession | BX290593 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:23619424 - go to primer design |
| BLAST e Value | 5e-59 |
| Hit Clone Code (BAC ID) | F24D7 |
| Hit Gene Code | At1g63690 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SIGNAL PEPTIDE PEPTIDASE-LIKE 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MDN11
| Sequence (A. th genome BLAST matches underlined) | >33-K018206-022-438-A05-8409 TGATCTGAAATTTCCNGGACATGAAGCCATTTACAATTGATATGTTTTGCAATTGATCAT ACTCATTTCTTTTTCTCAGCATGTATTTCCTATCTCTTATATGGGATGCTCCCTATACGT GAGAATTACTGGGAATGTAGAAATCTACCTCATCACACGGGCCTATGGGATCCTCCCTAT AGTGAGAAAGANNAGTTGGGTAAACGCATAGAAACCATTAACCATTAGAACGCAACTCAG TTTACTCATGAAACCAATTGACTCAATAACTCAGTTAACCCATCAACTCATTTGAGTCAA AATTTTCAATTCATCACGGATCATGGGTTAACCTGAGCTGAGGTGAGTTGAGCTGACCCA TGAATTTTGACCCATTTTGACACCCCTATGGGATCCTCCCTATAGTGAGAANNCCANACG TCGATACTGATGCTCCTTTGGCGAAGATGTGTTGCCATTACAGGACCACGATTCTACTTG GAATATTATTGCAACACTTGGTGAAATACGATGACAGAATCGATGTTTCGACATATACTC ATCTCCTTAGAGGGATAGATATGATGCGGAAAGGGGAACAAGCTATGTTGTTTCTTGAGG AAACACACCAAAAAG |
| GenBank Accession | BX290592 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19496640 - go to primer design |
| BLAST e Value | 3e-69 |
| Hit Clone Code (BAC ID) | MDN11 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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