SimpleSearch - Line and FST details


Line specific information

 
Line ID 438H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N442039)
Segregation Analysis 50:32:24
Confirmed for Hit At4g33270
Parent of DUPLO pair none
Parent of pair(s) 56608, 91389, 91390, 91391, 91392
Note

Gene hit At4g33260

 
Sequence (A. th genome BLAST matches underlined) 
>24-K018214-022-438-H03-8409
GAAGCCTTTACATTGTATATTGCCCATCTTACCCCTTTGTTGCAGTGCACACCTCCTGCT
TGAGAGTGTTAAGACTGACCGTACTCTGGTCGCTCTACGTATACACACCCGAAATATCCG
TTCTCTTTCGCACCTGAGACCTCCTACATCACCTGCTACTGTCCAACAAGAGTGCAATTG
GTACAATTGTTTTCCTTTACCTGAGATCATATAGTTGACTCTAGCTGATTGACTTGCGAT
CTCATCCATTTATCACACCTGGATGATTTCTTCCAAAGTGTGCGCTAATCCTGAGCATTC
CCGACTGAGCTCTGCAACACGATTACTGTCTCGCCCTCTAACTACACATTGACTCCGCAC
TCACCGACTCCCGTAATTCGTGCAAAACCCTGTGTGCGAATACCGAAATTGGATCATTCT
GTCTCCTCCGCTATCGGATCCTCCNNNGCAGATGCGCTTGGAAAGGGCACCACGCAAGAG
CCTTCACAGCAGATGTATGTTCCTCAAGCCTGTGCAGCCATTGTGTGGTTGAGTTTGAGG
AAGCGACAGAACGATCCCAGATGTGTACCACATTGTCGTTGCCACCACTTGCTATGG
GenBank Accession BX290668 [GenBank]
Graphic View Graphic view of gene At4g33260
Predicted Position of Insertion Chr4:16041302 - go to primer design
BLAST e Value 2e-73
Hit Clone Code (BAC ID) F17M5
Hit Gene Code At4g33260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin family protein / WD-40 repeat family protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At4g33270

 
Sequence (A. th genome BLAST matches underlined) 
>24-K018206-022-438-H03-8409
TTTCCCGGACTGAAGCCATTAAGCTGCTCCAAAAGCAGTTTCCGAGCCATTTTCTCACGT
GAATCGTATTCGTTGAAGCTGTGAAGACTGACGGACAAGGAAACCCATGATACAGATGCA
AAATATTCATTTTTTTTGCATCTGATTCATTCTTCATGAATTGTAGTGACAAGAAAAGTG
CATATTGTACAATTATATATATGTAAATGATATATATTGTTGAGTCAAACTTATTTGCTT
GCATTTGAATAGAAAGAAAGATCTTGATTATATATGTCAGATGATACAAGAAGCAGGAGC
ATTAAGTACTGTAAACTGTAAGATGATAATTGTAACTACATCAAAATAGACATTGAAACC
ACACTAACCTAATCACATTAGTGTGTAGAAACATGTGTTCGATTAGGGATTTTGGAAGAT
TTTATTTTTTCCACTATGGGA
GenBank Accession BX290667 [GenBank]
Graphic View Graphic view of gene At4g33270
Predicted Position of Insertion Chr4:16044600 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F17M5
Hit Gene Code At4g33270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin family protein / WD-40 repeat family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37