SimpleSearch - Line and FST details
Line specific information
| Line ID | 440E08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N442200) |
| Segregation Analysis | 50:47:47 |
| Confirmed for Hit | At2g25160 At3g07160 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4181, 4280 |
Gene hit At2g25160
| Sequence (A. th genome BLAST matches underlined) | >61-K018208-022-440-E08-8409 GGGGATGTGGAAATCGATTCGTTCCCTATGGGATCCTCCCTATAGTGAGACGGCTTCGTC CCAAGAACAAGAAGAGTACAGCACCTATGGTCCCCGGAGCATGGCCATTGCTCGGTCATT TACATTTATTTGACACCGTAAACCCGACTCACGTTACGTTTGGGGCAATGGCTGACGTGT ATGGACCGGTGTTCATGGCAAAGCTTGGCTCTATCAAAGTCATGATCATAAACAGCAAAG AAGTGGCCAAAGAGATTTACACGGTCCACGACAAGCTCCTATGGGATCCTCCCTATAGTG AGAGCNGCCGTGGAGTGCTCCCCTCTCCAACCCGGCGAGCAAAAATGTGGGTGAAACTAC GTTGTGCGGGGGGGGCCTACTTTCGTCCCCCAAAACATAAAACACAACGCCTCAACCGCT TCCCCACCGCGACACAAAGACAAAAATCTGCCCCCCCCACACACACCCGCAACCATACAT ACACGTGTCCGCCCCCCAGCAAAAACACCAACTTCCGAACGCCCTCTTGTTTCAGCCTCC ACCGCCCTTTTATTTAACCAGTATTTCTTTCCTCCACCCCCGCACCCCCCTAAAACCCGA TCCCCAAAAACTTCCCTATCCCGCCCCCCCCAACCAGTCAATCCCAACCGCACCCCCGCA CATAATGTTATTCTAACTACGTCACCGACCCCACCCCACCAGACAAGAATAAAATATTTT TTAAAAACAAAAAGAAG |
| GenBank Accession | BX290849 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10711201 - go to primer design |
| BLAST e Value | 1e-127 |
| Hit Clone Code (BAC ID) | F13D4 |
| Hit Gene Code | At2g25160 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 82, subfamily F, polypeptide 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g07160
| Sequence (A. th genome BLAST matches underlined) | >61-K018216-022-440-E08-8409 TGATCTGTAGATTTCCNGGACATGAAGCCATTTACAATTGATTGTAAGTTGTAATAAGCC TACACATTTTCAACTGCATTAATTGAATTTCTAAAACATATAAAGGTATCACTTGATGTA ATTCAGCTATGGGATCTACCCTATAGTGAGACCTGTCGGTATAAAAGCCAATACGCATGC AAATATGTCTGTCACTGACAAGGGTGTGAGCACAACTGCTACGATTATGCCAGCTATGGG ATCCTCCCCTATAGTGAGANNNNANATNNGCTCTGCATAATGCATATATNANTCCCACTT AAAACAATGATATAATTCACTTATTCAACATGTTGATATAAAGAATGGGAATATGGGATT ATCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | BX290850 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:2265399 - go to primer design |
| BLAST e Value | 1e-40 |
| Hit Clone Code (BAC ID) | T1B9 |
| Hit Gene Code | At3g07160 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glucan synthase-like 10 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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