SimpleSearch - Line and FST details


Line specific information

 
Line ID 445B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N442647)
Segregation Analysis 50:25:17
Confirmed for Hit At5g46760
Parent of DUPLO pair none
Parent of pair(s) 2076, 3030

Gene hit At5g46760

 
Sequence (A. th genome BLAST matches underlined) 
>57-K035339-022-445-B11C-8409
TGAGCCATTTAAATTGAATTTACAATTGATTGGATGTAGGTTCATGGAAGCACTTAAGGA
ATTGGATTTGGAAGTGAATCATGCGAGTTTATCCGTTGTGAATGATTTGATGATTCAACA
AGCTACGGTGAAGATGGGGAGCCAATTTTTCAATCATGACCAGCTCAAAGTTGCTTTGAT
GACGAAAGTCGGAGAAAACTATTGAACAAAGTTGGCATATCAAAGAGGGGAAACTAGTGT
TTTCATCGATGAAATGGGATCGAATTTAGCGGGTAATGTATGGTCTTTTGTAAAGTAGTA
AGTACTCATTTTGCATCACTCGCTTCATGTTGTTAAATGTTGTTGTTCATTAGGAGAACT
TGCTTAGTTCTTAGCTTAGTGTTATCATAAGCCTTAAGTGAGAAGGAAGTTGGAGACTAG
AAGACCAGAGAGAGTTAGCGAAATAATAAAATCTTTGGTTGTACTTGTATGTATATATAT
GTATGGAGTAAGATTAAGTGAGATCCTAAATTCTATTGAAGTTTTTTTATTCTATGATTG
AATTTTTTTGTTAGTTTGTAACTTTGTAGTGTACATAAAGGTCCAAATTTATGAACTGTA
GTGTACCAAAAAGCTGAGGAAAATAAGTG
GenBank Accession HG968977 [GenBank]
Graphic View Graphic view of gene At5g46760
Predicted Position of Insertion Chr5:18975841 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MZA15
Hit Gene Code At5g46760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Basic helix-loop-helix (bHLH) DNA-binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891024 [GenBank]


Last Updated on 10.06.2021 13:37