SimpleSearch - Line and FST details


Line specific information

 
Line ID 446E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N442769)
Segregation Analysis 50:43:25
Confirmed for Hit At4g00160
Parent of DUPLO pair none
Parent of pair(s) 76946, 76959, 77004, 77013, 77042, 77047

Gene hit At4g00160

 
Sequence (A. th genome BLAST matches underlined) 
>05-K023729-022-446-E01-8409
TGTAGGTTTAACTATCAGTGTTTGATCCATTTACAATTTACAATCTTTGTCGGTGAAATC
CTTCAGGCTTATGTTTTTCCAGTGCTAAAATCGCATTTCAACAAAACTGAATCCCTAATG
ACTATTCGCATTTCAACGAGTAGAAGAATGTGATAAGACTATGGCTTCCCCTTCAATATC
TCGGTTTTGTTTAAATTCGAACCGAATCCGATCGGTTTACTTATTAATACCAAAATGTTA
ACCATCTCTAAGAAGTAAACCCCTAAATGACCTAATCCGATGAATGACCTAATCCGATGA
TCGACCTATGGGATCCTCCCTATAGTGAGTC
GenBank Accession BX891131 [GenBank]
Graphic View Graphic view of gene At4g00160
Predicted Position of Insertion Chr4:63478 - go to primer design
BLAST e Value 3e-139
Hit Clone Code (BAC ID) F6N15
Hit Gene Code At4g00160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like/FBD-like domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g57610

 
Sequence (A. th genome BLAST matches underlined) 
>05-K023804-022-446-E01-8409
CATTGAATATATCCGGATGAACCACTTTTTTTAGTTCACGCGATGACCTTGAAACCCATT
CAGTTGAAGAATAATCTGAGATAGCGCCACGTGGATACCTACCTGGCTATCCAAAAGCTT
CTCATCTTCCATGGGATCCTCCCTATAGTGAGTACTATGGGTTCCCCTCCCTAGTGAGAG
TTATTACTCAATGCGGGGGGGGGGGGGCGGGAACGCCGTGAAATACAGGAGGGACTCGTT
TCCCTAAAGAATGCGCGCCTGACCGACCGGTGTTTAAGGGGAGACGGAGTCCTATAGGTC
GACGGACACCCGCCCCTCGTTTACAGCCGAGTCAGCAAAAAACGACTAAGGGGCGCCGAC
GCCGAGACAGCCTCGCGCCCACAAGGGACTGCACCGACGACAGACACCCATTTCTGCGTC
GGATTGATATGAGATTATGCGACCATACACGCTCATATACATAAATAGTGACAGTTTGAG
CTACCCATTCAATGGAGCC
GenBank Accession FR810356 [GenBank]
Graphic View Graphic view of gene At5g57610
Predicted Position of Insertion Chr5:23324580 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) MUA2
Hit Gene Code At5g57610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37