SimpleSearch - Line and FST details


Line specific information

 
Line ID 446E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N442774)
Segregation Analysis 49:30:16
Confirmed for Hit At5g39970
Parent of DUPLO pair none
Parent of pair(s) 2013, 3217

Gene hit At5g39970

 
Sequence (A. th genome BLAST matches underlined) 
>45-K023804-022-446-E06-8409
NNNNCCGTACTATTCGGACATGAGCCATTTACAATTGAATATATCCTGACTTCTTGAAAA
CGGAAGATTCTTTGCTTCTTTCACTGCCATAGAGTTAAGTGGCCCGAATGTTCTGGAAAA
TGCTCGTGCAACTCACATATTGACTGTGACCCTGCAAAGCTATGGGATCCTCCCTATAGT
GAGTACAATATCTCTTTCCAATCTTCTCGATGCATATGCCTGAAGGAGATGATGGACCAG
TAACTTTTGAAACGTTAAATGAAACTTCCTGACCATTGAAGCACACAGAGGATTCATCTG
AAGCTCCACCAAAAATCTTGCAGAAGTCATTACTTGATTTCCATATTTCAGATATTGTGG
AAGTGATGTTGCCTCCATCTCCAGCTTGAGATGCAAACGGAGTGTTGCTTACAGAAACAC
TCTGACATAAGATCCCTATTTCATCTTCAAATTGGTCTGAGATTATGCGAAAATACACAC
TCATATACTTAAATACTGACGGTTTGAGCTACCATTTCCGTGTAGCCCACTAA
GenBank Accession BX891137 [GenBank]
Graphic View Graphic view of gene At5g39970
Predicted Position of Insertion Chr5:15999129 - go to primer design
BLAST e Value 4e-120
Hit Clone Code (BAC ID) MYH19
Hit Gene Code At5g39970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation catalytics
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891136 [GenBank]


Last Updated on 10.06.2021 13:37