SimpleSearch - Line and FST details


Line specific information

 
Line ID 449E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N443061)
Segregation Analysis 50:25:21
Confirmed for Hit At5g10210
Parent of DUPLO pair 11715
Parent of pair(s) none

Gene hit At2g01010

 
Sequence (A. th genome BLAST matches underlined) 
>37-K019877-022-449-E05-8409
ACCGAATGATTGGTTCCAGGAACATGACCTCATCAGCCTGATCTCGGAACGGATCTCTGA
GATGATTAATGCACTACTTGACTGGATTCCCTGCGATGGATATATAACCTAACGAAGATT
AGCGCGTGGCGATGACTTGAGCTCTAGGATCCTATGGGACGCCGACGGATATGGAGATCA
TCTTTTGCCCGAAGGACGGATGAGCTTTGGCGGGACTGAATCACTTCGAGTCACCGTCGA
CAACTTTTCCGCATCCGAGATTTCAACCCGCAACTCATTCACCAATGCGAGCAAGGCAAC
AAATGCGATGACGAGAGGTGAACAAGCGCCGATGTTTGTGCCCACGACTTCCCCACGAAG
GAGAAGCCGCGGGCAAAGGTGTAAACCAAACTCAACAATTCCTTCAAATTAGGTACGAAA
CACAGGCCCCGGAACTCATCATCGAGCGTAACATCGCCCGTGAATTAACTGAGAAGGATA
GGTGGTAGGTAGTTCGATGCGCGAGCATGGAGCCTACGAACACTATGGGACGCC
GenBank Accession BX530937 [GenBank]
Graphic View Graphic view of gene At2g01010
Predicted Position of Insertion Chr2:3835 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F23H14
Hit Gene Code At2g01010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rRNA
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit BX530938 [GenBank]

Gene hit At5g10210

 
Sequence (A. th genome BLAST matches underlined) 
>37-K019882-022-449-E05-8409
CTCCCTATAGTGAGAGGCACTCCATACCGAATGATTGGTTCCAGGAAATGACCTCACAGT
CTGATCTCGAACGGATCTCTGGAGTGTTTAGTTCAATCTTACTGTTATTCCCTGCATGGA
GATAGAACCTAACGAAGAGAGTGGTTGGCGATGACTTGAGCTCTACGTTTCTATGGGATC
CTNCCTATAGTGAGATCATCTGTTGCCCGAATGACGGATGAGTTTTGGCGGAAGTGAATT
ACTTCAAGGCACCGACGACATCTTTTCGACATCCGATATTTCAACCCGCTACTCATTCTC
CAATGCGAGCAAGGCAACGAATGCAATGACGAGAGGTGAACAAGCGCCGATGTTTGTGCC
CACGACTTCCCCGCCAAGGAGAAGTCGCGGGCTGAGGTGTAAGACACTCTCGCCAATTCC
TTCAAATTAGGGACCAACCACGGGCCCCGGAACTCGTCATCGAGCGTTACATCGCCCGAG
AATTAGCTGAAAAGGATCGGTGGTATGTACTTCGATGCCCGAGCATGGAGCCTAC
GenBank Accession BX530938 [GenBank]
Graphic View Graphic view of gene At5g10210
Predicted Position of Insertion Chr5:3206475 - go to primer design
BLAST e Value 9e-82
Hit Clone Code (BAC ID) T31P16
Hit Gene Code At5g10210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nitric oxide synthase-interacting protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX530937 [GenBank]


Last Updated on 10.06.2021 13:37