SimpleSearch - Line and FST details


Line specific information

 
Line ID 449E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N443065)
Segregation Analysis 50:43:35
Confirmed for Hit At3g16570
Parent of DUPLO pair none
Parent of pair(s) 8228

Gene hit At3g16570

 
Sequence (A. th genome BLAST matches underlined) 
>69-K019882-022-449-E09-8409
TGATCTGANATTTCCCGGACATGAAGCCATTTACAATTGAATATATCGGGTTGGGATGGC
ACGCGGAGATGAAATATCTGACTACAAATTGTGACAGTCTCCTTAGATAACCGATCTCCT
CTTGTTGTTGAGTGTTTAATGTGGGACCCANCTGACAGTGCGTTTCATGCCGCCCCATGT
GTCACATTAGATTGTAACTCTGTAGGATCCTCCCTACAAGGAGAAGCGACCGAAGATTTG
TCGCATAGCTTGATGCACTATGGGATCCTCCCTACAGAGAGAAAACTATGGAATAAATAC
ATTATAATTAATAGTATCATCACTCATAAACGAATTTGTTATTGAAGTAAATATATATGA
AATGGATTTGTTTTCGTATTTATGGTCCATGGATGCATCATGCATGCATGTGCCGAAGAA
ATACCAGATGCTATGGGACCCCCCTAATAGTGAGAGGGAGACAGAGAATCTATATTAGTT
TAGTAAGGAAGAGTGTGGTGCTCCTCCAGCCAGAAAAATAAAATAG
GenBank Accession BX530944 [GenBank]
Graphic View Graphic view of gene At3g16570
Predicted Position of Insertion Chr3:5645141 - go to primer design
BLAST e Value 2e-80
Hit Clone Code (BAC ID) MGL6
Hit Gene Code At3g16570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rapid alkalinization factor 23
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX530943 [GenBank]


Last Updated on 10.06.2021 13:37