SimpleSearch - Line and FST details


Line specific information

 
Line ID 449G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N443082)
Segregation Analysis 50:42:33
Confirmed for Hit At3g50240
Parent of DUPLO pair 2586
Parent of pair(s) none

Gene hit At3g50240

 
Sequence (A. th genome BLAST matches underlined) 
>15-K019877-022-449-G02-8409
TCTCTTTGATTTTTGGTTTTAGCTGCTTGTGTTTTCTTCTATTTGAGTTACATAAATGAT
GCAGACAGGATCTGGAAAGACATACACTATGGGGACTGGTATTAAAGATGGTACAAAAAA
TGGGCTGATTCCTCAAGTTATGAGTGCTTTGTTCAACAAAATTGATTCAGTAAAGCACCA
AATGGGGTTCCAGTTACATGTCTCTTTCATCGAGGTTGGTTACTATGGGATCCTCNCCTA
TAGTGAGANNCNNNNNTNNNNNNNNNNTNNTNNTGNTNNNNNTTTNGNTGGTTTNCTGTC
TCTCATTTGATAANCANAGTNTCTTNNCTGGNGNATGCCGTGACTCCTGGGTGGCATGTC
TTCTGGCGGGTTGTCTCTGGTGATTGCACTGGTGGATGTGGTGCAACTGATTACCTTCTG
CATGTTGTCAATGGCCTTGACACACTTATGGATGATCTTGTCTTGAAACTTGCACCACCT
TTGGGTTAGACTGAGCTTCCGGTGTGCTTCGGCGAGACTCTTGCTTTCTCGTGAAGGGGG
CTTGTGTTCTTCAAAGTGGTAGCGGCTCGTGTCATAGTTCTCCTA
GenBank Accession BX530960 [GenBank]
Graphic View Graphic view of gene At3g50240
Predicted Position of Insertion Chr3:18628165 - go to primer design
BLAST e Value 4e-115
Hit Clone Code (BAC ID) F11C1
Hit Gene Code At3g50240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP binding microtubule motor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g31855

 
Sequence (A. th genome BLAST matches underlined) 
>15-K019877-022-449-G02-8409
TCTCTTTGATTTTTGGTTTTAGCTGCTTGTGTTTTCTTCTATTTGAGTTACATAAATGAT
GCAGACAGGATCTGGAAAGACATACACTATGGGGACTGGTATTAAAGATGGTACAAAAAA
TGGGCTGATTCCTCAAGTTATGAGTGCTTTGTTCAACAAAATTGATTCAGTAAAGCACCA
AATGGGGTTCCAGTTACATGTCTCTTTCATCGAGGTTGGTTACTATGGGATCCTCNCCTA
TAGTGAGANNCNNNNNTNNNNNNNNNNTNNTNNTGNTNNNNNTTTNGNTGGTTTNCTGTC
TCTCATTTGATAANCANAGTNTCTTNNCTGGNGNATGCCGTGACTCCTGGGTGGCATGTC
TTCTGGCGGGTTGTCTCTGGTGATTGCACTGGTGGATGTGGTGCAACTGATTACCTTCTG
CATGTTGTCAATGGCCTTGACACACTTATGGATGATCTTGTCTTGAAACTTGCACCACCT
TTGGGTTAGACTGAGCTTCCGGTGTGCTTCGGCGAGACTCTTGCTTTCTCGTGAAGGGGG
CTTGTGTTCTTCAAAGTGGTAGCGGCTCGTGTCATAGTTCTCCTA
GenBank Accession BX530960 [GenBank]
Graphic View Graphic view of gene At5g31855
Predicted Position of Insertion Chr5:11744674 - go to primer design
BLAST e Value 1e-133
Hit Clone Code (BAC ID) T8H11
Hit Gene Code At5g31855 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37