SimpleSearch - Line and FST details


Line specific information

 
Line ID 453F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N443464)
Segregation Analysis 50:14:11
Confirmed for Hit At4g38920
Parent of DUPLO pair none
Parent of pair(s) 2979, 9625, 92331, 92332

Gene hit At4g38920

 
Sequence (A. th genome BLAST matches underlined) 
>94-K018814-022-453-F12-8409
ATTTCCCGGACTGAAGCCATTTCTTTTTCTCCTTTCTTCGGCTTCCTTGGCGCTGCCGCT
GCGCTCGTCTTCTCATGATATCCATCTATACTCTCTTATAATCTCCTTCTTCTTCTTTTC
TCTTTGGTTCTGAATTGTTCACTGATCTTGTGTGTGTTTGTTGTTCTCATGATCTCCCTC
AAAGTTGCTTTTGTGCTTTAGATCGGCCCTGAGAAGTTCACCGATCTGTGTGTTGCTCAT
GATTTTTCTTAGAAATTTCTCCCTATGGGATCCTCCCTATAATGAAATACGGCCCACTAT
GGGATCCTCTCTATATTCAGATCAAAAATGTACATGTCCTCANTCATTATTATATTTTTT
CNNCCCCCCCCCACGCCCCGCAGCCGCAATCATAAAGAGGGGCGGAAGGGCGAGGGAAAA
AAAAAAAAAAAAACAACTCTTGGGGGGGGGGCGGGGGACAAATATCGCTCATACATCCTG
GCATATCTCCGAGCCATGGAAGAATAGAAGAATAAAGGGGTGTTATTCCATAGGCATAAC
AGGGTATAAACATGGAGCAACAGTACGCCGGCCCGCCAGGTCGCGCATAAAGGTTGCAAC
ACCAACCGGCCCTAAGCGNCGAACTCCCCAGGGCACACACACCGCGCAAGAATGTGGTAT
AAATTGGAGCGCAAAAAGACATGGACCCACAAATTTGGTTTCCTTCAACATGGGGGATCC
CCCACCCTTATTTAAAACCACCNATTCACAGAGGGCCCGGGCACAACGTGCTGGTAAAAT
CCTCGCTTTTACCTACCCTACCCTCCGGAGGCGCGCCAGTGTTTACCACACTTANTCGTC
TCTGCGGGCACCCAACCAATCCGGCGCGGAAACACGAACAATAACCCAAATGAACAT
GenBank Accession BX292363 [GenBank]
Graphic View Graphic view of gene At4g38920
Predicted Position of Insertion Chr4:18147380 - go to primer design
BLAST e Value 2e-67
Hit Clone Code (BAC ID) F19H22
Hit Gene Code At4g38920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vacuolar-type H[ ]-ATPase C3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX292362 [GenBank]


Last Updated on 10.06.2021 13:37