SimpleSearch - Line and FST details
Line specific information
| Line ID | 453G07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N443471) |
| Segregation Analysis | 50:30:28 |
| Confirmed for Hit | At1g13440 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2378, 97146 |
Gene hit F27A10
| Sequence (A. th genome BLAST matches underlined) | >55-K018812-022-453-G07-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGGTAAACACTCTC ATATCTCTATAATGACATCATTATACGCCCTGTTTGTTCTCACCATTCATCATTTTCATT CAAATGATCCATTTACATGATTCATTTGAATGATGCATTTGAATGATATTTGTAGTGTTT GTTTGATCATTTGATATTTAATTTAAATGATGCACTTAAATGGATCTTTATTTGTTTGAT CATTTTGTAGTTTATTCACATTCTCATTTAGATTAAAAAATGAATAAAATACCCATATTT TTATTTTGACATGCTTTCATTTTAACAAATGACAAATAATTTTGCTTTTGCCGTTTTAGT GGGTAAAAATAGTTTTACGGTTTTGGCGAAAAAAATATTTTACGGTTTTAACGGGAAAAC CTAAGAGAAAAGAGCGTTTATTAGAATAATCGGATATTTAAAAGGGCGTGAAAAGGTTTA TCCGTTCGTCCATTTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCA TTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGC AGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGCGGCTA |
| GenBank Accession | BX292374 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10534874 - go to primer design |
| BLAST e Value | 2e-101 |
| Hit Clone Code (BAC ID) | F27A10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At1g13440
| Sequence (A. th genome BLAST matches underlined) | >55-K018814-022-453-G07-8409 ATGAGCCTTTACAATTGATATATCCTGGACAACTACTGTTATCCTTCCTATACATGACCA CCGAGTACATGGTTCGTTTCTTCTTCTCTTCGATACTATGGGATCCTCCCTATAATAAGA GTACACCTGAATGATGCCTCCGAGTGAGAGAGAAAGCGAGAGGAGTTATCAACTGCCTAT GCAACATGCATGAAGCGGTGACAGGGGTTTGATCTTGTAATGACCTATGGGATCCTCCCT ACATCGAGATCGGCTATAAAATCCGCCCAAAACACGCATACCTTTATCTTGACGTGCTTT CAGTTTAACAAATGACAAATAAGGTAGCTTTGGCCGTTTTTTTGTTTAAAAATAGCCCTC CCGTTTTGGCGAAAAAAATATTTTACGGTTTTCACGGGAAAACCTAAGAGAAAAGAGCGT TGATTGGGGAGATGCGGATATTTAAAAGGGCGCGAAAAGGTTTATCCGGTCGTCCATTTG TATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGA CTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAAAAAGAT CCCTTGGCTCGTCTGGGTCGCCTA |
| GenBank Accession | BX292375 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4610209 - go to primer design |
| BLAST e Value | 6e-15 |
| Hit Clone Code (BAC ID) | T6J4 |
| Hit Gene Code | At1g13440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glyceraldehyde-3-phosphate dehydrogenase C2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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