SimpleSearch - Line and FST details


Line specific information

 
Line ID 455G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N443661)
Segregation Analysis 10:8:8
Confirmed for Hit At5g14550
Parent of DUPLO pair none
Parent of pair(s) 7992, 96101

Gene hit At4g25070

 
Sequence (A. th genome BLAST matches underlined) 
>39-K018776-022-455-G05-8409
CGACACATTTAATTCGAGACAACTCCCGTGATTGATGCTGTCTGAGCTACCAATAATATG
GGCAGCGAAGGCCATTTAATTATAAGATCCGATTTGGTGTATCGAGATTGGTTATGAAAT
TCAGATGCTATGGGATCCTCCCCTATAGTGAAGAATCGATTTAAGTGATATTTTTATGAT
GATTGCTTGAGATTCTCAAGCAACTGTACCATTACGAAATTGGAGGATTAGAAACATTAC
TCTATATGGCAAAACATACAAGGATGAGAAATACTACTCATATCATGATTGGGTTGTTTC
AGGGGGCTTGAACATATTTGTTTTCAAAGTAAGATTGGGCCGCAATCATTAAGTATAACA
AATATTGGAGGCGGCATCATCTCGGAGATATGTATGGATTGTCTACGGTCGCCTATAAGA
TCTACCAAGATTCGGTGACTTTGCAACGCCGGAAGC
GenBank Accession BX292648 [GenBank]
Graphic View Graphic view of gene At4g25070
Predicted Position of Insertion Chr4:12872294 - go to primer design
BLAST e Value 3e-122
Hit Clone Code (BAC ID) F13M23
Hit Gene Code At4g25070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation caldesmon-like protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At5g14550

 
Sequence (A. th genome BLAST matches underlined) 
>39-K018778-022-455-G05-8409
TGGAACTTCACCTGCGATCCTTTTCTCCACGCTGCTAACAGGAATAATGGGATTCATCCT
ATGGGATCCTGCCCTATGAGTGACGACCCTATGGTGGGCTAACTACGGCTACACTATGGG
ATCCTCCCTATAATGAGACGCGCGGCTGAAGACAAATACCTCCTAAAAAATACTCGCTAG
ATCGAGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCT
TTTTTTTCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCGTGAGATTATCAAAAAGGAT
CTTCACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR810487 [GenBank]
Graphic View Graphic view of gene At5g14550
Predicted Position of Insertion Chr5:4692731 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) T15N1
Hit Gene Code At5g14550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37