SimpleSearch - Line and FST details


Line specific information

 
Line ID 455H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N443675)
Segregation Analysis 50:46:35
Confirmed for Hit At4g10660
Parent of DUPLO pair none
Parent of pair(s) 12796

Gene hit F13A10

 
Sequence (A. th genome BLAST matches underlined) 
>56-K018776-022-455-H07-8409
TATCTGTNATTTCCCGGACATGAACCATTTACATTGCATGCATGTAGGGATGTGAATCAC
TTTTCTCTGTTAGGAGTCTGGATCGAGCCACCGTCTAAGGACATCTTAGATGTGATGAAA
TGATAAGCAAATGGATGATGGTAAAGGTAAGTGAAGCTATGGGACCCTCCCTATAATAAG
AGACCAAGCTATAGCAGACATGATGGAATACTATCACAGATTCACGACAATCCACGATTT
TAGAACGATGCATTGATATACGTATAAATAAGAAAACATATGACATAGTAATAAAATACA
ATATGCATAACAGGAACAAATACTAACAACTTAGTAATGTTTGTAAGAAGAAAGCAATAC
ATCTCAACAGTCATAACAATACCAACACATTCTGAAATAAGAACAAAAAAATCACATATA
TTATAGGGAGTAGAACAATAGATCCAGAGATTGCTCTTGTACGATGTCGTCGTTCTTAGA
CTTCTATGGG
GenBank Accession BX292666 [GenBank]
Graphic View Graphic view of sequence BX292666 of line 455H07
Predicted Position of Insertion Chr2:19151176 - go to primer design
BLAST e Value 3e-159
Hit Clone Code (BAC ID) F13A10
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g10660

 
Sequence (A. th genome BLAST matches underlined) 
>56-K018778-022-455-H07-8409
TCTTTCTGCATTTGCCATACTGTTGGGACAGGAAGGTGGTTACGCGGTGAGTACCTGGTT
TACTCGGCGAGTAGGATAGACTTCCTGGCTATCTAAACCATACTTTGGGAAGACTCACTG
TTCCTCATCCCAAGAACATCCAATCTCGTCTCCGAGGAATACATACTTAGCGAGATTGTC
ACGCCGTCAAGAGTAGTACTATTTATCTCCTCCCAATTTGAGGAGACTAGTTTATACGCC
ATCGGTATCTCGCTGCTACATGGATACATGAAAAAGAGCTCTCCTTTCTGCTCAGCCTAG
CAAATTCTCTTCGGACGATTATACCGATTCTGCATTATCATTACGCATATAAGCGCATCT
ATGTTCATTCCATGCTTGCTCACTCATTGTGCGGGAAGCTACATCAAAGTCATGTAAACC
CCTTCCTGAGCTAAAACAATAGAAGTGATCGTTGGCATAGACAAGGTTGCTATGCATGTA
TGGGTCAACATCTAAGAGAGCATGAAAATTTCTTGAGTAATCCACTCAGTTGCTCCAGGA
TAGCAAATGCTTATACGGATGATATATCTTGTAAAAGGTCTTAACGCTAACACCACACAA
GTACCTGATGTAGGGGCCGAAGAGAAAGCAATCGCTTGAAAGGCCAACTCACACTTTGGC
AAGTTTATAGCTCCTATG
GenBank Accession BX292667 [GenBank]
Graphic View Graphic view of gene At4g10660
Predicted Position of Insertion Chr4:6583462 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T4F9
Hit Gene Code At4g10660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CDC68-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37