SimpleSearch - Line and FST details


Line specific information

 
Line ID 456H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N443766)
Segregation Analysis 50:43:40
Confirmed for Hit At3g19830
Parent of DUPLO pair 11740
Parent of pair(s) none

Gene hit At3g19830

 
Sequence (A. th genome BLAST matches underlined) 
>16-K018779-022-456-H02-8409
TGATCTGTAGAATCCCGGACTGAAGCCTTTACATTGAATATATCCTGAATAAAGATGGAC
CTCGATTAGCTATTGTTCAATATTCCATCAAGGACGCTCCTCTACCCATCAACACTTCAT
ACGAGGGAACACCTCCGGTACTGATAAAACTAACGTGCATTATTAAGCCACAATTGTGCT
GGACTTGATCAACATTGCCATCCTACCTAATACTCAAGTCCATTCAACCTAGCAAATATC
ATTATCCTCGGACCGCTGGAGTGTTCAATACGAAAACCTTGGCACACCTGCCCAACCATA
GAACTCCCCTCAAAGAATCCCATCAATCTACCCTCCACTCAAGAGCGTAACTCTCTTCCT
ACTAATAGACGAAGCAATCGCTTTCCTCGTTCCACTGACTGCTCGCTTTCAAGACCGTGA
CATGACCTCCTCTCAACATTTCCCTCGACTATTGCTCATCCCCAAGAGATAATTGCTGAA
TTTCCACACTGCGACACATTGTCGGGCCTCTTCCAAACAACTATCACTCGGTGCAAATGT
CCGACAGGACCATTCACAATCCCAGCGCAATGAACTGTTCCTCATCTTAACGCACACCAT
GTTCACCACCTCCACCCAGGCAATCCATATCATATCCCCCCCACGGGACACTTAGAAACT
GCGTGGAACCTATGCACGCCCCCNANTTCCCCTCATTTGGCCTCCATCACCAACCATTTT
GTCTCCGCCTCTTTTCTCCAGTCCATAGCTTATCCCAAATAACACCANCAAAGAAGAAGA
ATGCGAATAGACCAATTGCATTACGACTAATCGGTGGAGACGGGATTGGGTGGATT
GenBank Accession FR810516 [GenBank]
Graphic View Graphic view of gene At3g19830
Predicted Position of Insertion Chr3:6888806 - go to primer design
BLAST e Value 1e-53
Hit Clone Code (BAC ID) MPN9
Hit Gene Code At3g19830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR810516 [GenBank]


Last Updated on 10.06.2021 13:37