SimpleSearch - Line and FST details


Line specific information

 
Line ID 458B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N443893)
Segregation Analysis 50:24:22
Confirmed for Hit At4g34380 At2g26670
Parent of DUPLO pair none
Parent of pair(s) 41602, 83964, 83965

Gene hit At4g34380

 
Sequence (A. th genome BLAST matches underlined) 
>66-K018852-022-457-B09-8409
ATCTTACATCGTATATAGCGGTTCTTCGGACTGACTATGGGATCCTTCGTATAGTGAATN
NANATTCGAACTTGTGCTACGCTCTACTCTTCTGTCAACAGACGTTTGCCTCCCTGTTTC
CATACGAGGACAACGACGTCAGGCTGCCTCGACTCTTTGGCCTCGGAGCTTTTCTTCCAG
GCCTATGTCAGATCGACTGAGCGTTGCGCGTAGCTCATGTCTCGATGACAGTAGGAGATC
GCCTCTCCACGATACCTACAGCCGATGCCATGACATATACATTTGTAATAGGCTGCGTGA
CCAAGAAAATCTACTTGCTTCTATGGTATCCTCCCTGTACTGTATGGAGAAAAAGAAAGA
GTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCACCGCTATTATAAA
GenBank Accession FR810553 [GenBank]
Graphic View Graphic view of gene At4g34380
Predicted Position of Insertion Chr4:16439839 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F10M10
Hit Gene Code At4g34380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin/WD40 repeat-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g26670

 
Sequence (A. th genome BLAST matches underlined) 
>66-K018858-022-457-B09-8409
TGATCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATATATTCCTTCAATTAAAAC
TACATTGCGTGACTTCTTCTGTAACCATTTTTCTATTCCGATCAAACCATGGCGTATTTA
GCTCCGATTTCTTCATCCTTATCCATATTCAAGAATCCCCAACTCTCAAGATTCCAATTT
TCTTCTTCCTCACCGAACCCACTTTTCCTTCGACCTATGGGATCCTCCCCTTATAGTGAG
GenBank Accession CT026362 [GenBank]
Graphic View Graphic view of gene At2g26670
Predicted Position of Insertion Chr2:11341762 - go to primer design
BLAST e Value 4e-87
Hit Clone Code (BAC ID) F18A8
Hit Gene Code At2g26670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant heme oxygenase (decyclizing) family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37