SimpleSearch - Line and FST details


Line specific information

 
Line ID 460A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N444067)
Segregation Analysis 50:47:42
Confirmed for Hit At1g55430
Parent of DUPLO pair none
Parent of pair(s) 4073, 9892, 10880, 11206, 93692, 93693, 93697, 93698, 93700

Gene hit At1g55430

 
Sequence (A. th genome BLAST matches underlined) 
>17-K018855-022-460-A03-8409
TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCTATGGGAT
CCTCCCTATAGTGAAGAATATTCACCTGCTTTACGCGCATTGGCATTCAATTGAACCGCG
GAAAGGATCCGTACTACTGTGCAACTTGCAATTTGGAATTTCACAGAGGCTGTCACGTCT
TTCTGCCGGAGATCAGAAGCGCTTTTCATCCCTCTCACCCCCTCACCTTCACCGCCTGAG
ATCCTGAATTTAATGCTTCTATCATACACCAAAATTGGAGGGACAGCTCCGCTTCAGAGG
AATCTTCCGAAGAGTTGATAAACGAAGTTGTTGACTATGATCATGAAGACGCTGGTGATG
ATGCTGTTGCTAATGAAGACGATGATGAAGATGCTGTTCCTAATGATGACGATAATGGCG
GTGGCGGTGGCGATATTTATGCTGACGCTTATAATGATGGAGCCTCTTTGTCCTATGGAA
ATCACCTGAAATGCGAATGTTGTGCTTCTCCTTTAAAAAATTGGGAATTACGTCTTTCTT
TTTCTCCACATTGACCATGATCCTCATAGGAGACTCCATGAGATGACCACGATTACCGAG
ATAGACAATGGTTGTGATGCATGCACCCTTCCATGAAAGAGCTCTCAGAGAGTTGGTGGA
TGTATGGAGTGTGAATTTTGAACTCGACGAAGCATGTGCTTCTCTTTCTCGCCAAATATA
CAACCCACTAAATAAACACCCCACTTACCCTCCACGTCGTCCCTACTAATGGACACCTAC
ACGGACCCGAATATGCCTATTACCAAAGCCATTTTCAAT
GenBank Accession FR810596 [GenBank]
Graphic View Graphic view of gene At1g55430
Predicted Position of Insertion Chr1:20699442 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T5A14
Hit Gene Code At1g55430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291141 [GenBank]


Last Updated on 10.06.2021 13:37