SimpleSearch - Line and FST details


Line specific information

 
Line ID 460B02
Vector Used pAC161
Line Availability available as T3 set from NASC (N393609)
Segregation Analysis 50:4:1
Confirmed for Hit At4g04610
Parent of DUPLO pair none
Parent of pair(s) 3015, 10801

Gene hit At4g04610

 
Sequence (A. th genome BLAST matches underlined) 
>10-K018855-022-460-B02-8409
TTGGCGGGTCACCTGATAGACTGGAGCGTTATTAGGAATGGTCGTGTATTTAAAGGGGCG
TGATTCAGGTTATATCGTTGCACCCATTGAATGTGTATGCCAGAATAGGGTTCCCCTACG
TGAGCGTTTGTTATGGCGTGCCATAATGACTTCTGTTCACCCACCCAAACTTCGGATGAC
ATAGACAAATGATCAGCCTTTCACATATGATCCCTTGTCTCGTCTCGGAGTACAGGATAT
GGGATCCCCCCTTCTACATTTCTATGAGGAATAAGAATTATATCTTCGTCTCGTTCCAGA
TTGCTATGGG
GenBank Accession BX291159 [GenBank]
Graphic View Graphic view of gene At4g04610
Predicted Position of Insertion Chr4:2326501 - go to primer design
BLAST e Value 3e-20
Hit Clone Code (BAC ID) F4H6
Hit Gene Code At4g04610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation APS reductase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g66820

 
Sequence (A. th genome BLAST matches underlined) 
>10-K018861-022-460-B02-8409
TGATCTGTAGATTTCCGGACTGNAGCCATTTACAATTGATATATATAACGATAGCCTATG
GCGATCCTCCGTAGTGAGGAGATCTCTCGTCCCCAAGAAAATCGCTTCTTTTATTTTTTT
GTTTACTAAATCTTCACATAATCTTTTTAAAAAAAAAAGTCCTAAATTTCAAATGATTCG
ATGTTCTTTTCAGACATGGAGCGAAAAACCCTATGGGATCCTCCCCTATAGGGAAAAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTATGGGATCCTCCCCTATAGTGAG
GenBank Accession BX291160 [GenBank]
Graphic View Graphic view of gene At5g66820
Predicted Position of Insertion Chr5:26688975 - go to primer design
BLAST e Value 3e-35
Hit Clone Code (BAC ID) MUD21
Hit Gene Code At5g66820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37