SimpleSearch - Line and FST details


Line specific information

 
Line ID 460E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N444114)
Segregation Analysis 50:26:16
Confirmed for Hit At5g14610
Parent of DUPLO pair 12579
Parent of pair(s) none

Gene hit At5g14610

 
Sequence (A. th genome BLAST matches underlined) 
>13-K018861-022-460-E02-8409
CGGACTGAAGCATTTACATTGATATATCCTCATGAGGGTTCGAACCCCATGTCCAGCATT
CTATCTGCCTCGTCCAGCACAAGGTAAGATACTTGATGCAGACTGATTCTCTTCATTTCA
AGGATATCATTCAGTCGCCCGGGAGTTGCAACAACAATATCTACACCTCTTTCTATTTCC
TTCAGCTGAGGACCCTTGGGTGCTCCACCATACAAACACTACAAATATACATTGACAAAA
ACACTCAATAAGACACTTCTCAAGTAGCATGTTCAGTACTTATGTATTCAAGTATTTTCA
CTTACCGCACACGAAATTTTAGATGACTTGCCAAATTTCAGAGCTTCAACTTGGATTTGT
GTGGCCAACTCCCTATGGGATCTCCCCAAAAATAGAAAGAGGTTCCNNGATTATATTTTT
CTGTTCATCCAAAAGGATGTGNTGATCAACTGGCAAGGAACCTGGACCCGTACGTTTGGA
GCTGCTGCTATACATGGAGACAAGTCGCAGGCTGAGAGAGACGACGTACTGAATCAATTT
AGAAGTGGTAGGACTCCTGTTCTTGTTGCAACTGATGTAGCTGCTCGTGGACTTGACGTT
AAGGACATAAGGTATGAATATGATTCCAGTTTCAAATTCAACCATCAAAATTATAGAAGC
ATATGATCCGAATGTAGAAATTTGATTCACAGGGGGGTGGTCAAATATTATTTTCCAAAT
GGAGTAAAGGATTATGTCCATAGAAATTGAAAGAACTGGAAGAGCTGGAGCAACCGG
GenBank Accession BX291201 [GenBank]
Graphic View Graphic view of gene At5g14610
Predicted Position of Insertion Chr5:4713487 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T15N1
Hit Gene Code At5g14610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DEAD box RNA helicase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291200 [GenBank]


Last Updated on 10.06.2021 13:37