SimpleSearch - Line and FST details


Line specific information

 
Line ID 461C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N444191)
Segregation Analysis 50:46:42
Confirmed for Hit At1g77280
Parent of DUPLO pair none
Parent of pair(s) 2890, 3180, 4495, 93843

Gene hit At4g36150

 
Sequence (A. th genome BLAST matches underlined) 
>51-K026076-022-461-C07-8409
GTTATGGGTATCTCCCGTATATCGAGAGCACCAGAGATTTCTTACTCTTTACGATTGCCT
TCGAGGATTCAGGTGCATTCCCCCCCGACTTCTTGGGACCGTTATCCTCCTTCATCCACT
CGTCAATGATAATGCTCCTATCCCTCATGCCGTCTTTCCACATCTTACCGACCTCATGAA
TAAACCCACGCCGTAGGAAATCGTGTTGCCACTTTTCATAGAACATACTAGTCAGAGTGG
TCTTACCCCTACCAGGCGTCCCAACAACACCAATGGTAAAAGTATCCTTGCACTCAAAAT
CCAACTTCTCTTCCAATTGCTTAAATCGTGTTTCAATGCCAAACATAGGATGAGGCTTAT
CACGAGCAGCTTC
GenBank Accession CR397425 [GenBank]
Graphic View Graphic view of gene At4g36150
Predicted Position of Insertion Chr4:17105878 - go to primer design
BLAST e Value 1e-86
Hit Clone Code (BAC ID) F23E13
Hit Gene Code At4g36150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g77280

 
Sequence (A. th genome BLAST matches underlined) 
>51-K026071-022-461-C07-8409
TGGGATCCTCCCTAAGGAGAGAAATTGAAAAAATCCAGACTTTGATCTTATTTTACCTGT
TTCAAATTGCAGAAACCTTCATAAACGTCAAGAACAGAGTCGAAAGTTCTAACCAGAGAG
AGAAGCGAAGAGTTCCCTGCGCGATCCACAATCTCTAAACAAAACCCAAAACCGAAACTT
TTGTGTTAACAAAAACATAAAAATCAAAGCTTTTTGGTAAGAGAAATTATATTAAGGAAA
AGCTCAGAAATGTAACCATTTCCAAGGATATGAAGAGCGATCACAGTATCACCAGGCTCA
GCGACTTTAACCAGAGCCCAAGTGAGTAACTCTCTGCTCGGAGCGTCAAGCTTCACGCCG
ACAAGAATCGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR397424 [GenBank]
Graphic View Graphic view of gene At1g77280
Predicted Position of Insertion Chr1:29034119 - go to primer design
BLAST e Value 6e-88
Hit Clone Code (BAC ID) T14N5
Hit Gene Code At1g77280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37