SimpleSearch - Line and FST details


Line specific information

 
Line ID 462A04
Vector Used pAC161
Line Availability available as T3 set from NASC (N444260)
Segregation Analysis 50:20:18
Confirmed for Hit At5g55550
Parent of DUPLO pair 12847
Parent of pair(s) none

Gene hit At5g55550

 
Sequence (A. th genome BLAST matches underlined) 
>25-K018985-022-462-A04-8409
TGATCTGANATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTGATATTGGTACTC
GGACAAATGCGGGTTCTGCTTTTGGCCTCGGTTTGAATCATGACTTGAGTTTGAATTTGA
ATCCAAGCTGCGATGGGACAAGTTCTACGTTTGGTTATAACCGTATTCCAAGCAACCCTT
ACTTCAACGGTGCTTCCCCGAACCGTTACACCTCTCCAATCGGGCACAATAGAACTGAGT
CTCCTTACAATTCGAACAATAGAGACTTATGGGGAAACAGAACCGACACTGCAGGTCCCG
GTTGGAACTTGAATGTCTCGAATGGAAACAACAGAGGAAATTGGGGACTTCCTTCTTCTT
CTGCTGTTAGTAATGATAACAATGGCTTTGGAAGGAACTATGGGACAAGTTCTGGACTTT
CCTCGTCCCCATTTAATGGTTTTGAAGGTTCTATAGGGGAACTGTACAGAGGCGGCTCAG
TCTACAGCGACTCAACGTGGCAGCAACAGCAGCTACCATCTCAGTCTTCTCACGAGCTAT
GG
GenBank Accession BX291321 [GenBank]
Graphic View Graphic view of gene At5g55550
Predicted Position of Insertion Chr5:22502798 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MTE17
Hit Gene Code At5g55550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291320 [GenBank]


Last Updated on 10.06.2021 13:37