SimpleSearch - Line and FST details
Line specific information
| Line ID | 466C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N444675) |
| Segregation Analysis | 50:8:8 |
| Confirmed for Hit | At2g41180 |
| Parent of DUPLO pair | 926 |
| Parent of pair(s) | none |
Gene hit At1g13080
| Sequence (A. th genome BLAST matches underlined) | >83-K019013-022-466-C11-8409 TATCCTGACATTTCCCGGACATGAAGCCATTTACAATTTTTAATCTTACTCTAATAAATA GACTTATCTATCTCGATATATCCATACTATGTAATCGTTGACTTAAAAAGGTATAATATT ATACAATCGTTGACATTAAAAACCATATAATATACAATGGATTGAGAAACTGCTTATCCA CTCAACCAATCAAAACAAAGTGTAATCGGAACACGTGGATTTTGAACCACAAGACTTGGT TTATGCTTGTGTCACATTTATGATTTCAACGAAGATAATATCCACAAATCTATGGGATCC TCCCTTATAGTGAGACGNAGAACATACACTATCTTCACAGTCAGATTCCCCATAACACGG CAATGATATCCGACTGCATTAAAACTCATGAGCATATGATCACATATGGAAACTGCATCA ATAGTCATATGAGACTGCATAAGATATACACCCTCTTTACTTGAACATTTGGATAAATAC AGGATGTATCCCAATATGCTTCTCGCGATGACCCCATCGCCGAAAATTAGACGCAACTAT ACGTCAAGACTGAGCGAACAATTGAATGCACGACAGCAAAAATACATGATCTCTCTTAGA GATCTCTTGGCAACCTCAATGAGAACAACCCTTCTAAAAAGGAGCGTATATCATGCGAAT GGATCGTCTTCACAGCACACCTTTTTCCGTGAGAACCATCAGCTTTCCTTCGTAGCAAAA CGCCAATCTTTACAGACCGACCTATGTGGTATCCTCACATTGGGCAAACCTCAAACGCTT CGC |
| GenBank Accession | BX291663 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4458787 - go to primer design |
| BLAST e Value | 1e-133 |
| Hit Clone Code (BAC ID) | F3F19 |
| Hit Gene Code | At1g13080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 71, subfamily B, polypeptide 2 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At2g41180
| Sequence (A. th genome BLAST matches underlined) | >83-K019008-022-466-C11-8409 GACCTGTCTGAAGCTTGAGTGACATGTCTCGACTCTCCTCGGATATGATCTCGCAACCCA CTGTGATGCTCCCGTAGCGTAAACGTTGACTTCCTCTTCTGCTTAGGCGGGATCCTATGG GATCCTCCCTTATAGTGAGATGAGATCAGTTTAATCTCTGGTGTATATGATCACAATCGG AAAAGAAATAATAATCCATATAGAGCTTTTAAGTTATCACGGACTTTAGTTGAACATTTG GATAGATGCATGATGTATCCCTTCTGCTTCTTAGGATGACCCCATCTCTGTATAATAGAC GCAATAATACCTTTATATTTTGCGAATTTGGAATGAATGACAGAAGAGTTTTGTTATTTC CCTAGCAATTACTAGCCACATTATTTTATATTTACCATGCTACAAACACGCTATCCTTAT GGAAATATTCCGCTTGATGCAAACCAACATTTAATTGAAAACAACGAACTTATTTCGTAC GAAA |
| GenBank Accession | BX291662 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17165638 - go to primer design |
| BLAST e Value | 2e-114 |
| Hit Clone Code (BAC ID) | T3K9 |
| Hit Gene Code | At2g41180 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | VQ motif-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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