SimpleSearch - Line and FST details
Line specific information
| Line ID | 467C08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N358734) |
| Segregation Analysis | 58:2:1 |
| Confirmed for Hit | At5g20885 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g20885
| Sequence (A. th genome BLAST matches underlined) | >59-K019009-022-467-C08-8409 TTTCCCGGACTGAAGCATTTACATTGAATATACCTAGTGGGATCCTCCCTATATGAGCTT CTTCATCGAAGATTCTGGTCTCATAGTCACTCAGCTTCTCTACAAAATGGCTGTTCTCAT CACCGTCTTGAGATGGATCCTCGCTTGGATCTTACGCTACCGATCCAGATCCAGATCCAC CTCTTCTTCCACTTCCGCCTGTCCTTCGATTTCCTCACAGGCGATCAAAGAAAGCCTCTC CGTGACGACGTTCCGTGACGCAGCTGAGAGATCTCCGGCGATGATCAACGACACCTGCGC TGTGTGTCTCGGAGATCTGGAAGATGGAGATGAGGTTAGAGAACTCAGGAACTGTAGCCA TATGTTTCACCGTGAGTGTATTGACCGGTGGTTGGATTATGAATGTTGCGGTGGTGATGA GAATAACGAAGGTGAGGAGGATAATCACCGTACGTGTCCTCTTTGTAGAACTCCGCTACT TGCTGCTAATACGACGTCGTGTGGTGATTGGCCGACGAAGAACGAACCTATGG |
| GenBank Accession | BX291746 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:7084667 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F22D1 |
| Hit Gene Code | At5g20885 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MTH12
| Sequence (A. th genome BLAST matches underlined) | >59-K019014-022-467-C08-8409 CTCTTAACCCTCATCTTTCCCTTGGCGAAGGGCTATGGGATCCTCCCTATACTGAGAGCN CNNNCTTCCCATCNATGAGACTGACAAACCAGAACAATGTGTGGGAGCTTATAGATGCCA AAACCCCAGAAGCCGTTGCCCTTTGTTGGTATGATTTGTTCTTACTGACCGTGAACAAAA CAGA |
| GenBank Accession | BX291747 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:24040566 - go to primer design |
| BLAST e Value | 1e-10 |
| Hit Clone Code (BAC ID) | MTH12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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