SimpleSearch - Line and FST details


Line specific information

 
Line ID 467E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N444796)
Segregation Analysis 50:37:36
Confirmed for Hit At2g42740
Parent of DUPLO pair none
Parent of pair(s) 943, 54895, 90538

Gene hit At2g42740

 
Sequence (A. th genome BLAST matches underlined) 
>93-K019009-022-467-E12-8409
GGACATGAGCCATTTTACATTGATATATCTGTGCGACCCTATGGGATCCTCCCTATAATG
AGAGATCGCCTCACCAGAGCCTCCAAGGTTCCTCCTGTTTTTTACCCATTCTCTGTGGTT
TTCACTCTTGTTGTCACTTGGTTATAATCGATTGATTCGTGGTTACTTGGTAGGTTTTGG
AACAATTGAGTGGTCAAACTCCTGTTTTCTCCAAAGGTTAGATTTTTTCTCATATTTGAA
AGCTTACAAATAGTCTGGTTGATAGATTTAGTAACCTATGGGATCCTCCCCTATAGTAAG
ATAAAAAGGCCGCGGTGCTGGCGTTTTTCCATAGGCTCCACCCCCCTGACGAGCATCACA
AAAATCCACTCTCAAGTCGGATGTGGTGACTCCCGACAGGACTATAAAGATACCAGGCGT
CTCCCCCTGGAAGCTCTCTCGTGCGCTCTCCTGTTCCGACCCTGCCGTTTACCGTATACC
TGTCCGCCTCTCTCCCATTCAGGAAGCGTGGTGCTTTCTCATAGCTCACGCTGTAAGAAT
CTCAGATAGGTGTAGGTCGTTCGCTCAAAGCTGGGCTGTGTGCACGAAGCCCCCGTTCAG
CCCGACCGCTGCGCCCTTATCGGTAACTATCGTCTTGAGGCCAACCCGGTAAGACACGAA
TTATCGTCACTGGCAGCACCACTGGTAACAGGATTAACATAGCGAAGGATGTAGGCGGTG
CTACATAGTCCTTGAAGTGGGGGCCTAACTACGGGTACCCTATGAGAAC
GenBank Accession BX291767 [GenBank]
Graphic View Graphic view of gene At2g42740
Predicted Position of Insertion Chr2:17791938 - go to primer design
BLAST e Value 3e-112
Hit Clone Code (BAC ID) F7D19
Hit Gene Code At2g42740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ribosomal protein large subunit 16A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR810705 [GenBank]


Last Updated on 10.06.2021 13:37