SimpleSearch - Line and FST details


Line specific information

 
Line ID 467G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N444812)
Segregation Analysis 50:45:40
Confirmed for Hit At5g25250
Parent of DUPLO pair none
Parent of pair(s) 61756, 93890

Gene hit At3g41762

 
Sequence (A. th genome BLAST matches underlined) 
>31-K019009-022-467-G04-8409
TGATCATGTAGATTTCCNGGNACATGACGCATTTACAATTCGATATACTCCGGACATGTA
GATTTATCCATCGTAGGGTTTTAACTTTACTATGGGATCGTCCCATATAATGAGACNAAA
GAAATGAACTTCCTTATATACATGATGGTTTAAAAAAACCTCCGACGTATGAAGTGCTAC
TAAAAATCTTCGCCACCCGTCTCGTTCCACTTCCAATGTGATCCTCCCTATAGAGATACT
TATATGATCCGATGCGTAGTATCGAGATTGGATATGAAATTCTGATGCTATGGGATCACT
TCTATATGGTATACTACTCTTACAATAAAGTTAAGCTGAAATGTATTTGGGGGAATCATC
CACTGTCTTGACTCTGTTGGACATTTTTC
GenBank Accession FR810710 [GenBank]
Graphic View Graphic view of gene At3g41762
Predicted Position of Insertion Chr3:14196692 - go to primer design
BLAST e Value 6e-09
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At5g25250

 
Sequence (A. th genome BLAST matches underlined) 
>31-K019014-022-467-G04-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGGCCTAACATCACA
CCTCTGTCGGCGGCGGGTCCCATTTGTGATAAATCCACCATCACAATAGATAGTCTAATG
GACGAAAAAGGCGAATATTTCGATGCTGAGATTCGACGCAATTAATTCGAGAAAAATCCC
GTGATTGATGCTGTTGAGTTACCAATAATATGGGCAGCGAAGGCCATTTAATTATAAGAT
CCGATTTGGTGTATCGAGATTGGTTATGAAATTCAGATGCTATGGGATCCTCCCTTATAG
TGAGAGCTTTCCAAGAAGTCATGGGTGTTTCCATGGCAATCTTGCACCGTCTTCGACGTT
TCTCCGGTGAACTATACTTTCAAAGTCCAAGCCATGAGCGCAGAGAAGCTTCCTTTTGTT
CTTCCCGCTGTTTTTACGATTGGTCCTCGCGTTGATGACGATGACGCGCTGATTTTGTAT
GCTATGGGAT
GenBank Accession BX291786 [GenBank]
Graphic View Graphic view of gene At5g25250
Predicted Position of Insertion Chr5:8749838 - go to primer design
BLAST e Value 3e-97
Hit Clone Code (BAC ID) F21J6
Hit Gene Code At5g25250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SPFH/Band 7/PHB domain-containing membrane-associated protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37