SimpleSearch - Line and FST details


Line specific information

 
Line ID 467G10
Vector Used pAC161
Line Availability available as T3 set from NASC (N444818)
Segregation Analysis 50:48:34
Confirmed for Hit At3g46340
Parent of DUPLO pair none
Parent of pair(s) 6708, 6726, 6748, 10724, 10730, 10743, 72890, 72920, 72990, 73018, 73108, 73134, 73162, 73188, 73214, 73236, 73257, 73306, 73348, 73388, 73408, 73427, 73459, 73485, 73498, 73508, 73520, 73521, 73522, 73524, 73525, 73526, 73527, 73528, 73529

Gene hit At3g46340

 
Sequence (A. th genome BLAST matches underlined) 
>30-K118873-0022-467-G10C-3144
CCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACC
CGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTAATGAACGTCT
ATATGCTCTTATCGTTGCAATAAAGTATTCCACATTTTCATAAACTTTCTATAAGGATGA
AAGTATAGTTTTTAAAATTTAGAAGGTTTAGATATTTTTCGTTTAAAACGTTTTTCTTCT
GATTCTTACTAAGATTAGTTAAAATAATCACACAATCAGAATTAATACCGAAAGGCTTTT
TCCTGATCTGATAAATTAAAGGACTGGAATACTTACATATTGGATGTCGACCATCGATGG
TGCATAGAGATGTCAAAAGTACAAATATATTGTTGGACGATCAATTTACTGCTAAAATGG
CGGATTTCGGGCTGTCAAGATCTTTCCAACTCGGAGATGAATCTCAGGTTTCAACCGTTG
TTGCTGGTACTCCTGGATATCTTGACCCCGAGTAAGTATTTTTCTTTTTTCGAATTATTA
AGAGGTTCTGAGCTTAGGTCCTTACAGCCTCTCAAACCGGATACCAGAGATATGGAATGA
CCTATAATGAAAATGGACACAAAAGTTTTAGAACGTTGTCCTTACTATTAGTGGTACAAC
CAACACATATTAATTGTACCTCATATTCTTGCCTCTCCAGATATTACAGAACAGGTCGGT
TAGCTGAAATGAGCGATGTCTACAGTTTTGGAATTGTGTTATTGGAGATAATAACAAAC
GenBank Accession HG968983 [GenBank]
Graphic View Graphic view of gene At3g46340
Predicted Position of Insertion Chr3:17030854 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F18L15
Hit Gene Code At3g46340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX291789 [GenBank]


Last Updated on 10.06.2021 13:37