SimpleSearch - Line and FST details


Line specific information

 
Line ID 469C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N444955)
Segregation Analysis 50:16:11
Confirmed for Hit At4g13620
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At4g13620

Sequence (A. th genome BLAST matches underlined)
>19-K019027-022-469-C03-8409
NTTGTCCTGTAGATTTCCGGACTGAAGCCGTTTTTACAATTGAATATACATTGATGGATG
AATAGAAGATGTGAGCTCATGATCATGAGGCGACACAAAGTAGCTCGGAGTCGAAGAAGC
AGGAAGAAGAGGAGATTTCATACCTTCCAAAAATATTGGAACACCGAGAAGTTGTGGCGG
CGTCGAAGAACTCAAGAACCCGTAGATTCCAGAAGACAAGAGCTTGTCGTGCATGAAGCT
ATGGGATCCTCCCCTATAGTGAGACTATGTGATTTTCCCTCTCCTATTTGGACGTGAATG
TAGACACTTCATGGTATCGATTTTGTAATGAGAATAATTTGTTTATTGCTTTCGCCTATA
AATACGACTGATCGTAATTTGTCGATTTATCAAAATGTACTTTCTTTTTGTAATAACGCT
GCGGACATCTACATTTTTTGAATGGGAAAAAAATTGGTAATTACTCTTGTCTTTGTCTCC
ATAT
GenBank Accession BX291931 [GenBank]
Graphic View Graphic view of gene At4g13620
Predicted Position of Insertion Chr4:7932490 - go to primer design
BLAST e Value 1e-102
Hit Clone Code (BAC ID) F18A5
Hit Gene Code At4g13620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details