SimpleSearch - Line and FST details


Line specific information

 
Line ID 470B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N445044)
Segregation Analysis 50:34:15
Confirmed for Hit At5g37130
Parent of DUPLO pair 9505
Parent of pair(s) none

Gene hit At1g54920

 
Sequence (A. th genome BLAST matches underlined) 
>58-K019028-022-470-B08-8409
CTTTGGACTAGAATGGTACTCGTGAAGAAAACATTCATTTTCTGCACCGACTGTATATGC
TATGGGATCCTCCCTATAGTGAGAGTGATATTTTGCCGGGTGACTTATGAGTGTAGTGTT
TGTTTCTTCTTTATTCTAATAGACAATTGGAAAATGGTGGCCACGAAGGTTCGGTGGATC
TCGGCTGATCACATTGGCCCATATATTCGCAAGAGGTAGCAAGGAATGCTCTGCGTTCCA
CTCCACCGGCTTGATTCCTGCTTCACAGATCCGAATGAAGTAAGCATATTCAGAGTTTCG
GATCATGGCGGTTGCATCATTTAGGTCTATATGATCTTTCTAAACACAGTTTCTATGGGA
TCCTC
GenBank Accession BX293015 [GenBank]
Graphic View Graphic view of gene At1g54920
Predicted Position of Insertion Chr1:20475061 - go to primer design
BLAST e Value 2e-120
Hit Clone Code (BAC ID) F14C21
Hit Gene Code At1g54920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At5g37130

 
Sequence (A. th genome BLAST matches underlined) 
>58-K019032-022-470-B08-8409
CCGGGACATGTAGCATTTACACTTGCAGCACCATCCAGTAGTAGTATGAAACATAAAGTA
GGTGAGCAGTGAGACACCAAGTTAAATAGTAAGGCATTCGTGAAGAAAACAATTAATTTT
CAGCACCAACAGAGCAGACTATGGGATCCTCCCTATAATGAG
GenBank Accession BX293016 [GenBank]
Graphic View Graphic view of gene At5g37130
Predicted Position of Insertion Chr5:14685356 - go to primer design
BLAST e Value 2e-49
Hit Clone Code (BAC ID) MJG14
Hit Gene Code At5g37130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein prenylyltransferase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37