SimpleSearch - Line and FST details


Line specific information

 
Line ID 470H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N445115)
Segregation Analysis 50:41:36
Confirmed for Hit At3g61130
Parent of DUPLO pair none
Parent of pair(s) 3041, 6905

Gene hit At3g61130

 
Sequence (A. th genome BLAST matches underlined) 
>56-K019028-022-470-H07-8409
GATCATGTAGATTTCCGGACATGAAGCATTTACATTAGACCAGATAGGGATGCTTGTCCC
TAACGAGGTGATAAGGAAGTACGGTCCACGACATTAACCAACCTCAATATCACTAACAGA
ATACATAATATATATGTTGGCTATGCCGGCCGTCACAGATTGCTCAATAGAGCTATGGGA
TCCTCCCTATAGTGAGAATATTTCAATAGTATAAGTGCTGATGAGTTTTATTTTATCTAT
AATTAATTGAACTGAAATTTATGTCTATGGGATCCTCCCTATAGTGAGAAGAGAGACATC
ACTGGTATATACCTCAAGTGGCAAAACATGGTAAATAACTCTTTAATTCTTTGCAACAAA
TAGTCTAATGATGGTTTATTATTTTATTTATTGTGGTTTGCTCATTTTGGCTTGTGTTGT
TTAGAATGAGAACAGGACACTATGGAAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX293081 [GenBank]
Graphic View Graphic view of gene At3g61130
Predicted Position of Insertion Chr3:22624873 - go to primer design
BLAST e Value 6e-86
Hit Clone Code (BAC ID) T20K12
Hit Gene Code At3g61130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galacturonosyltransferase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T6J22

 
Sequence (A. th genome BLAST matches underlined) 
>56-K019032-022-470-H07-8409
TATCATGAGATTTCCNGGACTGAAGCCATNACAATTGAATATATCCTGTATATATTCTGT
TAGAAAATGGTTTGGGTCAACCAATGTTGGGGTTGTACCATTTTGACGTTGCATTGCTGG
ATACCTGGTCGATCTTTCTATTCTGATATTATTATTCTATTAAGCTAATACTTTTCTATT
CTGATGATTTGATCATATATTTCAATAGTATAAGTTCTGATGTGTTTTATTTTATCTATA
ATTAATTGAACTGAAATTTATGCCTATGGGATCCTCNCCTATAGTGAG
GenBank Accession BX293082 [GenBank]
Graphic View Graphic view of sequence BX293082 of line 470H07
Predicted Position of Insertion Chr3:11930766 - go to primer design
BLAST e Value 6e-114
Hit Clone Code (BAC ID) T6J22
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37