SimpleSearch - Line and FST details


Line specific information

 
Line ID 472A12
Vector Used pAC161
Line Availability available as T3 set from NASC (N445228)
Segregation Analysis 50:21:18
Confirmed for Hit At1g12210
Parent of DUPLO pair none
Parent of pair(s) 5900, 5947, 5963, 10459, 10489, 10503, 79998, 80023, 80034, 80062, 80073, 80074, 80076

Gene hit At1g12210

 
Sequence (A. th genome BLAST matches underlined) 
>89-K019879-022-472-A12-8409
GATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATAGTATACTGTAGATTCCTCTG
GAAGATACCAATAGAGGCTGTGATTCCAAAGATCGCGAGACACAGAGTGGTAGATTCCCC
TAACGCCTTGGAATAGAACCGCTGACTTTGTTGTTGGATAATAGCAAGTATATCATGACT
ATGCAATTCGCATATTGCTATATGGGGATCCTACACTCATCAGTGAGATTCTTTCGGTGT
ATGCCTATGCGATGCGCTCCATACTGAGATGTGCTATAGGGATCTCCTTTCTGATTGGGA
ATCTTCCTGAACTAAGGAGCAATATATGAAACACGACTTCGCATCCTCCCCATACAAGCT
ATCATAGCTATATTTTAAAATTGGAAGAATTTCATCTTCCATGCCAGAAAAATCTGTAGC
AGAAGTCAAAACCTCAGTTGCATGACGCCATTCTTGTATTGTCCTCTTGAATGACATGGT
CTCACCAATGACATTCAGTACTATGGGATCCTCGCTATAGTGAG
GenBank Accession BX531096 [GenBank]
Graphic View Graphic view of gene At1g12210
Predicted Position of Insertion Chr1:4142449 - go to primer design
BLAST e Value 3e-94
Hit Clone Code (BAC ID) T28K15
Hit Gene Code At1g12210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RPS5-like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531096 [GenBank]


Last Updated on 10.06.2021 13:37