SimpleSearch - Line and FST details


Line specific information

 
Line ID 472C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N445241)
Segregation Analysis 50:47:28
Confirmed for Hit At3g09600
Parent of DUPLO pair 2518
Parent of pair(s) none

Gene hit At3g09600

 
Sequence (A. th genome BLAST matches underlined) 
>03-K019884-022-472-C01-8409
TGATCTGANATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGTAGGCTGGAATTA
ACCTGTCTAAGAAACTAAACTTTCTCTATGGGATCCGCCCTATACTGTGACTGGAGATAT
AATTTCATTGGGAGTGTCTTTGATCCTGAAACGAGAGGCCATGTGGAAAAGCTCAAGGAA
ATGGATCCTATAAATTTCGAAACTGTGAGTCAAGAGTTTACAAGCTTTCAGATTAATTGG
TGTTCAAGCTCTTAGCATTTCTTCACTAATCACATAGTATGGTGTTTACAGGTTCTGTTA
TTGATGAGAAACCTCACAGTTAACTTATCAAACCCTGATTTAGAATCCACTGTAAGTGTT
AAATTTGCGATAAAAGATTTGTGATGACCAACTTTCTCAGAGTCTGAAACTATTTCACTC
TCAACCAATGAGTTGGAGGCACTTCTTTTATGATCTTTGGTTCCTTACATTGAAATGAGT
TTTTTTGCGCTTGCGTGATCAAATTTAATCTAACCTCAGCTATGGGATCCTACCTTATAG
CTAGAGAGGAAAGTCCTCTTATCATATGACAACGTGACGACCGAGCTCCCAAGCGTTGTT
TCCCTTGTCAAGAACTCAACAAGCGACAAATCAGCATAACAAAAATATGAGCCATCAGCT
ATGGG
GenBank Accession BX531117 [GenBank]
Graphic View Graphic view of gene At3g09600
Predicted Position of Insertion Chr3:2947691 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F11F8
Hit Gene Code At3g09600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Homeodomain-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531117 [GenBank]


Last Updated on 10.06.2021 13:37