SimpleSearch - Line and FST details
Line specific information
Line ID | 472G06 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N445294) |
Segregation Analysis | 50:13:7 |
Confirmed for Hit | At3g54050 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g54050
Sequence (A. th genome BLAST matches underlined) | >47-K019879-022-472-G06-8409 TGATCTGTAGATTTCCGGACTGAAGCCGTTTAAATTGAATATATCCTGAACATCAACGGC GCCTGGAACTCCGGTCAGGTTAGAGATTCCGGCACGTTGAACAAGTGAAGCGATCTGCTT ACAAGCCAATGATATACTCGACATCACTATCGTCAGCTCTGCATCTATCTCTCCTTTCAT CTCTTGTCTCAGCAACCAGCCCGTCAACGTTTGAAGTTCGTATCCACTCTTCTTCCTCGC CGCCGTTTTCGTCTCAGCAGCATCCGCCGCTACGGCCATACACCTCACTCCACTCGCATA CTGATGGTTCCTCACTCCAGTTGGTGCTCGTTTCCCGTTGTTGGAGAAGAGAGATCTCGG TGAAAGGATTGAAGGCTGGGATGATGATGCCACGTGACGTGAGCTTGAGAGAAGAAGGTG AGACGACGTCGTTGTTGCGGCGGTTGCTGCCATTTTTTCTGTGTTGTTTTGAAAAAAACT TTGGAAGGTTTGGTTTTGGAGGAGGGAGAGAGGATCGGATATTCGGATTGTGAGGTGGAC GAAGGATTCGATTCATGTGGGTTCCACTTATCTTGTGTTATGACACGTGGCTTTGCTCTT ACGGACCTAAACAAAAAGATAAGCATTAAGCCATTAAGCATAGGGCCAAGTTTTGTTTTG TTAATGGCAGGTCAAAGATAATAAAGAGTTGGGCCTGATGTAAATTTTTGTTTTTAGCAA ACCCAAAGGAAATTGGCCATATAAAGTATAAACCAAACTAAACCGAAGAAATTGACCAGC TTCCTACAAGTAGGTGTTGGATAGTTTCTTGCC |
GenBank Accession | BX531187 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:20017359 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F24B22 |
Hit Gene Code | At3g54050 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | high cyclic electron flow 1 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |