SimpleSearch - Line and FST details


Line specific information

 
Line ID 472H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N445311)
Segregation Analysis 50:46:35
Confirmed for Hit At5g23900
Parent of DUPLO pair none
Parent of pair(s) 3098, 6909

Gene hit At5g23890

 
Sequence (A. th genome BLAST matches underlined) 
>88-K019879-022-472-H11-8409
GATCTGAAATTTCCCGGACTGAAGCATTTACATTGAATATATCCTGATAAATATATAGCT
TCATTGTGTAATCAAACATTTCACCAGCTGGTTCTTACGAAACCTCGAAAACTCCGAATC
ACACTGAAAAATAAAATCAGAATCCAAAAACAGATGTTCATCCGCATATACCTTCAATCA
AACTCTTCTTCTTAACTCTGGAAGACTTCTTGTCATCGTTATCGGAATCATCCCACCCAG
CCAAATTATCAGCCGACGACTTTGACGAATCCGATCCGGTCCACGCATCAACTTCAGGCT
TCTGCGAAACACAGACAATTCCATAACCCGATTTCCTATGGGATCCT
GenBank Accession BX531203 [GenBank]
Graphic View Graphic view of gene At5g23890
Predicted Position of Insertion Chr5:8059184 - go to primer design
BLAST e Value 1e-158
Hit Clone Code (BAC ID) MRO11
Hit Gene Code At5g23890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GPI-anchored adhesin-like protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g23900

 
Sequence (A. th genome BLAST matches underlined) 
>88-K019884-022-472-H11-8409
CTATTTGGAGGGTCTTCAGTCCAATGTCCAAAGGTTAAAGACTTACAAGGCTAAGTTGGT
GGTGTTCCCTCGCCGTTCCCGTCAAGTCAAGGTATCAATCATTTGAGATCTTAGTTAGAG
TAGTATATTTGAGACACCCTCTTGATTCTTGAGTTCTTGTTATAACAATTTNTGTATCTT
TTGTTTTCAGGCTGGTGATTCTACTCCAGAGGAGCTTGCCAATGCTACTCAAGTTCAAGG
TGATTACATGCCAATTGCCAGTGTCAAGGCAGCTATGGAGCTATGGGATCTCCCTATATA
TGAGACTATGGNATCCTCCCTATANTGAGGCTATGGGATCCTCCATATAGTGAGCTACAC
TGAATTGACAGCTCCCATTTGGACGTGAATGTAGACACGCTATGGGATCC
GenBank Accession BX531204 [GenBank]
Graphic View Graphic view of gene At5g23900
Predicted Position of Insertion Chr5:8064584 - go to primer design
BLAST e Value 4e-152
Hit Clone Code (BAC ID) MRO11
Hit Gene Code At5g23900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L13e family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37