SimpleSearch - Line and FST details


Line specific information

 
Line ID 473B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N445329)
Segregation Analysis 50:46:32
Confirmed for Hit At1g57720
Parent of DUPLO pair none
Parent of pair(s) 3111, 6911

Gene hit At1g57720

 
Sequence (A. th genome BLAST matches underlined) 
>34-K019789-022-473-B05-8409
TGATCTGAGATTTCCNGGACATGAAGCCATTTACAATTGAATATATGCCAGTGATCTTCG
TCGATGTTAGTACCTTGAGATTCGATTCGTCTCTCCGATTCTTTATAATCGGAATTTATT
GGTTTGTGGAATCTGATTTTGGGTTCTCTTCTATTGCTCTTATAGGTTCTTTGGAAATTG
TTTCCTCTATACTCGTTTGGATCAGGAAGAGACTCTCTCTCAGGTATTTCATCGAACACT
TACCCTACAATTTAGTGAAATTTCTGTGTGATGTAGAATTCTCTATGGGATCCTCCCTNA
TTAGTGAGACAAGTCCATACGCTGAAGGAACCCTCCTACCTTGTTGAGTGTAACAAGGGA
GACCATGTTCTCATCGTTGTACTTATAGTCACAGAACCATAGTGAGTACCCCTCCGGGTC
ATACATGTCCCAGAATCCTGCAATGAAGAAAAACATTCAAGGCATTGAGCTTAATAGAAT
GTACTTTCAGACTCTGGGCCATACATGTCCCATAAACCATAGTGAGTACCCCTCTAAGTC
TACTATATCTATGGGA
GenBank Accession BX531221 [GenBank]
Graphic View Graphic view of gene At1g57720
Predicted Position of Insertion Chr1:21380113 - go to primer design
BLAST e Value 7e-132
Hit Clone Code (BAC ID) T8L23
Hit Gene Code At1g57720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Translation elongation factor EF1B, gamma chain
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531221 [GenBank]


Last Updated on 10.06.2021 13:37