SimpleSearch - Line and FST details


Line specific information

 
Line ID 473B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N445332)
Segregation Analysis 50:19:12
Confirmed for Hit At1g53660
Parent of DUPLO pair none
Parent of pair(s) 94603, 94605, 94606, 94609, 94610

Gene hit At1g53660

 
Sequence (A. th genome BLAST matches underlined) 
>58-K019789-022-473-B08-8409
TGATCTGAGATTTCGCGGACATGAAGCCGTTTACAATTGACTACTATGGAGATCCTCCGT
ATAGAGAGATCACTTAACACCAGGAGCAAGTCATGTGAATCATTGTCCCTCCAAGCGCAG
AACGCACCTTTATTTCCGAACATGACTATACCCACTGCATCACATGGAATCGAAAATAAA
ATTGAGCGCTGTACCTTACAAACTGAGAAAATCTACATACAATTGGATTGATCCAAAAAT
TACGAAAGATCGAACTCTATAACAGCTGTTTATCCCAATAATCGTTTGTGCATTGGAAGT
ACCTATCTCACCATTGAACCCTACATTTAAACCTACTGCTGTATTAACAAGAATTTTATT
ATTATAATATTCCTTGTCCACCACCATCTCCCATTGTAACAGAACTTTACCTGGATTGTC
AAATCTAAAAACTTTACCATCTACTACTGTCCACCAAATCTAATAAAATGCCCTCTTGAC
CTCAAAGACTGCATCTATAATACATATATCCTATAACATATGAGTGTGACACTTCACTGT
AGACCTTATTGACTAACATTGACCGCTATGGGACCCCCCNAAATAGAACTGANTCGCCAG
TCTTTACCGGCGAGTTCTGGTAGGTCCTCTATTTGAATCTTTGACTCCATGGGGATTGGG
GATCCTCTATG
GenBank Accession FR810772 [GenBank]
Graphic View Graphic view of gene At1g53660
Predicted Position of Insertion Chr1:20034625 - go to primer design
BLAST e Value 4e-50
Hit Clone Code (BAC ID) F22G10
Hit Gene Code At1g53660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation nodulin MtN21 /EamA-like transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR810772 [GenBank]


Last Updated on 10.06.2021 13:37