SimpleSearch - Line and FST details


Line specific information

 
Line ID 473C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N445347)
Segregation Analysis 50:6:4
Confirmed for Hit At5g43080
Parent of DUPLO pair none
Parent of pair(s) 3432, 3558, 7072

Gene hit At5g43080

 
Sequence (A. th genome BLAST matches underlined) 
>83-K019789-022-473-C11-8409
GATCATGAGATTTCCCGGACTGAAGCCATTTACAATTGAGTGGACCATCAGATCTACTAA
TTTAGTTACCCAGCGGCTGTGATAATTTTATGTTTTCTGACATTTTTAAAATAAGCTAAT
ATGCTATGGGATCCTACCCTATAGTGAGACTATCGAGTGCGCACCGACAATGCCTGTATC
ACCATAGCTGCCTCTAACGGGACTTGAATATGTCAACATTTAGAGACAACTTTCGGCATT
CGGCATATATAGTATAAAACCAGGTAGCGGATTCGTTGGTTTCTTTCCTTGGTGTTTTGG
CTTGATAGATGTCTTATGACTGCTATGGGATCCTCCCTATAGAGAGACTAAGTTCGACGT
ACACTTGCAATTACGTGTCCGTTCAGGTGACCGAAAATTGCACTCTGGTGGCAACTGCCT
TTTGAACATCTGGCCCTATATACTCTATAGTTCATAGGTCTCAAGAGACCTCACGTTTCA
TCATCCTGAATGTTAGATACCATTTGCGTTTCCACATTCGGACTGTTCATCCTCCGTGTC
CACTGTTCTCCACGAAGCACTGAACGATGTAGAACGTGATCTTTGTGATGCGCAAGACCT
TGGCAATGCTCTATTGGATAATCCCTATATAGATTGAAATCCTCCCTATTATCAGCTCTT
GTCAAGGGCGGTGGCCAAAGCGAGCCAAGAGTGGGGAATATTTCCGGTGGTTAACCACGG
AATCCCCACCGAGCTGATACTGCCGGTGCTACAAGTGGGAATGGGAGTTTTTCCAGCTAC
CGGAACCCGAAGAAGGAAGCCGTACCGAATCCAGA
GenBank Accession BX531242 [GenBank]
Graphic View Graphic view of gene At5g43080
Predicted Position of Insertion Chr5:17294625 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) MMG4
Hit Gene Code At5g43080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclin A3;1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37