SimpleSearch - Line and FST details


Line specific information

 
Line ID 473E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N445372)
Segregation Analysis 50:17:10
Confirmed for Hit At1g18580
Parent of DUPLO pair 12211
Parent of pair(s) none

Gene hit At1g18580

 
Sequence (A. th genome BLAST matches underlined) 
>93-K019789-022-473-E12-8409
GATCATGAGATTTCCCGGACTGAAGCCGTTTACATTGAATATTGTGCGGGTCCTCCTAAG
AGAGAAGAGCGTTTATTAGAATAATCCGATATTTAAAAGGGCGTGAAAACTGTTTATCCG
TTCATCCATTTGTATGCGCATGCCAACCACGGGGTTCCCCTCGGGAGAGCTTGGCATTCC
ATGCGATAATGACTTCTGTTCAATCCACCCCAACGTCTGAAAGCCTGACGACGGACCATC
TTTCCAAAAACATCCCTAGGCTCGTCTGGGTCGGCTATGGGATCCTCCCTATAGAGAGAC
TAAAATGTAGGCGCTGAGATTTTAGTTTTGCTCTGCTTGATCTTCCCTCATGAAAAAATC
TGGATCTTGATGAGGTGACAACAAATGAGAATTGTATGACCTAATGAATTTTAACTTGAT
GATGCAGCAGAAATTGCTGATTTCATTTACTAGAGATAAAACATTGCGTGATCGTTCATA
ACTGCGAAGGATAGTGTCTTGTGGATAATCTCATCGATTGACAGGAGAGAGACACGAGAA
CCGAAATGGAATATCCTCCCCATGAACTCTTCACGGAAGATGTCACACATGCTTCCTACT
TCTCCTCGGGAACTCCCCACCTCCGAGGGAAAAAGAGGATCCCTCTTTGGGATCTTCCCT
ATAGTGAGAAAGAGAGGGGGGGCGAGCANCGGATAACAAGAAGGGGGCAGGTAGAACCGA
CCCCCCGCACGCGATGGGAGAAGTATGGGAAAGGATAGAGGGGAATTGCGGTGGGGTGAG
AGCCGTGTGACGGCGAGGAGGTAGCTAGCGGATTGGAATGCCCAGCGAAAGGAGACGCCG
ACGCAAGAGA
GenBank Accession FR810780 [GenBank]
Graphic View Graphic view of gene At1g18580
Predicted Position of Insertion Chr1:6396333 - go to primer design
BLAST e Value 2e-80
Hit Clone Code (BAC ID) F25I16
Hit Gene Code At1g18580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galacturonosyltransferase 11
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR810780 [GenBank]


Last Updated on 10.06.2021 13:37