SimpleSearch - Line and FST details


Line specific information

 
Line ID 473G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N445390)
Segregation Analysis 50:22:9
Confirmed for Hit At5g10370
Parent of DUPLO pair 11772
Parent of pair(s) none

Gene hit At5g10370

 
Sequence (A. th genome BLAST matches underlined) 
>47-K019789-022-473-G06-8409
ACTCTTCTGTGTCGCTATGGGATCCTCCCTATAGTGAGATGCATTGTATCGTTCCCACCC
AGAGGTACAATGGTGATGTCACCCCCTTATAACTCCGACTGCAAAAGCTTTGCCTTTGCA
TGGAAAGCTTTCCTTCGAAGACAGTTTAGGGTTTTCCAGAACCATCCTGGGAGACGGAAA
GTGATATTTGCCACAAATATTGCAAAGACGTCGCTGACTATTCCTGGTGTCAAGTATGTA
ATTGATTCCGGGATGGTGAAAGAGAGTAAATATGAATCTATGGGATCCTCCCTATAGTGA
GAGATATTGGGCTGTTACTCGCATGTGTTTTTTTTACTTCAGGAACGTCGATAGACTGAG
ACCCTTTATAAACGTGAGAAATGCGCGCGCGGGAAAAAAACATGAGGGGCGGGGGGGGGG
AGGGGGCAAACAAGAGAGAAAGTGGCAGAATACGGAGAAAACCTGTTAAAGACGTTGGAC
AAAATCGAAGAGATCACGCTTCTATAGAACGACGCGTAGGGGATTCAATGGGGAGCGCCG
GTGGTGAAAGGCGCGGGGCTGAGGAGCGCCGGGGCGCGGGCGCGCGGACAGAACGGAAGC
TGTGGACGACAGCAAAAATATGCCACCGGGGCGGCGGGCGGCGGGGGGGCACGCAGTAGA
TGGCAGAATGACTGAAGAGGCGGAGATGGGAATGTAACAAACTATTAACCGCAACCAGCC
ACCCCATGATGAGAGGGAGAGAAAAAGAAGAAGTCAGTACCTAAGAGCGCNATAGGGAGA
CAAAGGTGAA
GenBank Accession BX531295 [GenBank]
Graphic View Graphic view of gene At5g10370
Predicted Position of Insertion Chr5:3263027 - go to primer design
BLAST e Value 2e-89
Hit Clone Code (BAC ID) F12B17
Hit Gene Code At5g10370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX531295 [GenBank]


Last Updated on 10.06.2021 13:37