SimpleSearch - Line and FST details


Line specific information

 
Line ID 477E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N445749)
Segregation Analysis 50:29:23
Confirmed for Hit At5g51710
Parent of DUPLO pair none
Parent of pair(s) 2111, 3062

Gene hit At5g51710

 
Sequence (A. th genome BLAST matches underlined) 
>37-K019283-022-477-E05-8409
ACAGAGAGAATGGTTAAGGCCTCAGACGGAATCGAGGATATATTGGAGGTTGCTGGACAA
ACTTGTGACTATGGGATCCTCGGTATAGAGGGTCCGAATTACTCAANNNNNNNNNGNNNN
NNNNTGNNNNNNNNNNNGNNNNNGTGNNNNNGGNNNGNNGNGNGNGNNNNNGNTGGGNNG
GGTGTNNGGGNTGGGGCCTCNNNTGNGCAAGGGGGCCTGGGCTTCNTATATGGTCCCCTT
CCGGGGCGCGATAACACTGTGACATCTGTCGATACAAGGCGCTAGCATGGTACTATATAC
ACTAGCGCGGAAAATTCCGATGANTTACGGTTGATGCCGGAGAATTACATGGTATATAGT
GAGTAGAAGAGACATCATGGATTTAACTGACGAGTGTAACGTCCTTTGCCAACCCAAATG
GAGAGGCGCCAAGCTGTTATATNNCCTTGNNGNGGGGTTCCTTTGGGGCTGGCGGTTTGT
TGCCTACGACTGAATTTGCTCACCATACCCTATGGGATCCTCCCTATAGGGAGCCGTCAT
TACTC
GenBank Accession FR810855 [GenBank]
Graphic View Graphic view of gene At5g51710
Predicted Position of Insertion Chr5:21006087 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) K10D11
Hit Gene Code At5g51710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation K efflux antiporter 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR810854 [GenBank] FR810854 [GenBank]


Last Updated on 10.06.2021 13:37