SimpleSearch - Line and FST details


Line specific information

 
Line ID 478H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N445886)
Segregation Analysis 50:40:28
Confirmed for Hit At1g67280
Parent of DUPLO pair 12748
Parent of pair(s) none

Gene hit At1g67280

 
Sequence (A. th genome BLAST matches underlined) 
>80-K026072-022-478-H10-8409
TTTACAATTGAATATATCCTGCGTATGGGAGCCTGCCTATAGTGAGATTGGAAATTTGGT
AGATATAACTTACTATAAGTAAGCTCAATCACAAAGTGTGAATCTTCCGGTCCATAACCA
AGGAAAGCATTAGTATACTTCTCTTCTGGTATATCACGCTTACGTAGAAGCTTCATCCCA
AGACATTCAGTATAAAACCTACAGCAATCAGATGATTCTTTTAAACTTAATGTGACTTTA
AGAGACTCAACATCAAAGCCATATCACAGGAAAGCCAAAGTGAAGTATGGGATCCTCCCT
ATAGTGAG
GenBank Accession CR397589 [GenBank]
Graphic View Graphic view of gene At1g67280
Predicted Position of Insertion Chr1:25189831 - go to primer design
BLAST e Value 2e-125
Hit Clone Code (BAC ID) F1N21
Hit Gene Code At1g67280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR397590 [GenBank]

Gene hit F23F1

 
Sequence (A. th genome BLAST matches underlined) 
>80-K019033-022-478-H10-8409
GACATGTGCTTGGGACCGATGGGAGCCTCCCGATAATAGAAATTTTACCCTGATTAAATT
GAGCCCGCTTGAACGCGCTATTTGATCTTTCTCCCCACCGAAGGTTTGCTTGCCTGAATG
TTGGTTGCGCCCTGCCCCGGCCGCAGAGGAGGATATACCCAGACCTAGAATGTAAAAGAG
AAGAGACCCCGCGTCACACCTAAGCTGAAAGAAACGCCAATGTAACCATTCTATGTGTAC
ATCGTTGTGTTCCGAATTTGTACCTAAACAAAAAGAAAAGAAAGGATT
GenBank Accession FR810893 [GenBank]
Graphic View Graphic view of sequence FR810893 of line 478H10
Predicted Position of Insertion Chr2:12787643 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F23F1
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37