SimpleSearch - Line and FST details
Line specific information
| Line ID | 480A12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N445996) |
| Segregation Analysis | 50:39:36 |
| Confirmed for Hit | At3g10550 |
| Parent of DUPLO pair | 1069 |
| Parent of pair(s) | none |
Gene hit At3g10550
| Sequence (A. th genome BLAST matches underlined) | >89-K019791-022-480-A12-8409 TGATCTGAGATTTCCNGGACTGAAGCCTTTACATTGAATATATCCTGATAACAGAGGACA TAATAGATCGCTATGGGATCCTCCCTATAGTGAGATGCCACTCGTTGCTTGTCCTGTCTC CATCTATAATGTATCCGAATAATTGATATGCCCATTAGAAGATCTTGAATGATATGCATG TTCGTGATACTGTACACTGACATCGTAGGCAGATGAACGTATACTTCCAGATTACGTGTA CTGCTTCTGGGATCCTACCTATAGTGAGCATTTGCCTTCATATTTGGTGTTGCAGACTTT CCTGGTAGATTTTATGGATTGCTTGCTTTCATGTCGTTTTGGGAACTTCTTATGCAACAG GTAAAACTTTCTTTTGAAGCTCCAGACTGAAGTGATTCTGAAAATAATTGGCATTATGAT TTATCAATATCTGAGCTGGTGTAAATTTCAGTGAAAAAGAGAGGGAACAATGTGGGATTG CTGATGCCTGTGGATGCCTATGGGCGTACTTGACTGATCTGCGTTCATTTAGTGCAACTT CTCATGTCCATTGTAACCCATTCTATGATCCTTTGAAGTATGACGGGCCATTACTACCTC CTGCAGCATCTCTAT |
| GenBank Accession | BX531421 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3294452 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F13M14 |
| Hit Gene Code | At3g10550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Myotubularin-like phosphatases II superfamily |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g02650
| Sequence (A. th genome BLAST matches underlined) | >89-K019800-022-480-A12-8409 TATCATGAGATTTCCCGGACATGAAGCCATTTACAATTGATCTAAACCTGAAGCCATTAT AATTGAATAGATCTAAACAAACCAAAAGTATTACTATAATTGCAAGAGGAATAATTGCTC GGTCACCTGCATAAATATAGGTGAATAATTGTTATGCCCATGGGAAGAGCTTGAAGATTG CGAGGCTGCTGATCCTGAAGACTGACGCACAGGAGATGAAGGGAAACTTCCAGCAGACGA AGACTGCCTATGGGATCCTCNCCTATAGTGAGCATCTGCCTGCATGTTGCCCGCACATAA ATTATCTGATACGCGCTATAGAGTGCTTGCTATCCTGACAGTGTACGAACTCCTGATGAA TGCGGAAGATCTGTCTTTCGAACCTCATCCATGCAACGTCTCAGCAACTCTCTGGCATCT ATGATTCATCGCTATCTATCTCGCCGTACCTCTAACTGACTCTGAGACGTCAAAATCGTG TCACTGCTGCTGCTTGCGGATGCCTAAGACCGGACCGGACTGCTCTGCGATTACTTACCG AAACTTCTAATGGACATCGAAGATGACTCTATGGTCCTCTGCGCTATGACGGACCATTAC TACCTCATGCTTCATCCCTATGAGAGCCCCCCCCAATACAGGGATCGTCCTTCAAGTGTT TCTCTTATTCCTACTTGAAGAAGAAGGTCATGGCAGGGTTAAGTAATAATTCTCAAGTAC AAGGGCAATGGAGGTATTTCATTTCTTTTAATTATGACCCGAGTTTGTGTTGACCCGACC GTAACTGATTCGGATCTTCCCTTCTCTGTGGCAGATACTTGGTTTTGGGCCAGCTTGTTC CATCTGGGTTTAATGGATGACGCGATCATCCTACTCCAAACGGTAAACGC |
| GenBank Accession | BX531422 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:568549 - go to primer design |
| BLAST e Value | 6e-117 |
| Hit Clone Code (BAC ID) | T14P4 |
| Hit Gene Code | At1g02650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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