SimpleSearch - Line and FST details


Line specific information

 
Line ID 480D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N446028)
Segregation Analysis 50:6:3
Confirmed for Hit At2g43040
Parent of DUPLO pair none
Parent of pair(s) 11668

Gene hit At2g43040

 
Sequence (A. th genome BLAST matches underlined) 
>60-K019791-022-480-D08-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACCGTTGATATATCCTGGTCCTGCCTATT
CAACACACCCTCCCGATGCATAGATGGAGTCTGAGGCGGATCGGGATGCAGCTGCTAAGG
GCCATTGCGGCACCTCACTGGACACCTAACTCAAAGATGAGATCCTGTACAATCGAGCTC
CACAAAGTATCGTCTGCACACTTATCGCTTACCATGATGCATGAGGTGCGCGCGACACTG
TAACATCATTCGATCGCTCTCACATCTCTTTTCGCATGCCTCAACATCTCTTTGGATCCC
CAATCTATCGACATCTTCATGCTAACCATATCTTGAGCATTGTTTAACGCTCTCCGCGCA
TAACCCGTGCCGGAACCAGCTAAAGAAGGCTCTACACTGCAAAGCTTATGAGCTATCTTT
AGCGCCACGATATCAACGGGGTGTCCGTGTATATGCCGAGACTAACTAGGAAGGTTAGCT
GCAGCACTGTTTTGACCTGCTGCACTATAAGAGAGAGACAAAGCGAGCCTTCTCTCAATA
CCCATAAACACACCAGGCATTACTTCTTCAAGCTGCTTGGCGAGAACCGGGGACTGACTA
CCTCCAATAGCGCAAAGGAAAAGTGCTCAAACACCCACGGATCCC
GenBank Accession FR810906 [GenBank]
Graphic View Graphic view of gene At2g43040
Predicted Position of Insertion Chr2:17896938 - go to primer design
BLAST e Value 2e-64
Hit Clone Code (BAC ID) MFL8
Hit Gene Code At2g43040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation tetratricopeptide repeat (TPR)-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37